Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1112 |
Symbol | cspD2 |
ID | 3690297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 1165928 |
End bp | 1166173 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637727568 |
Product | cold shock transcription regulator protein |
Protein accession | YP_332524 |
Protein GI | 76811741 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000170415 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGTTG TAAGTAGCGA CTGTGTGACA GGGGAAGTAG GTATGGCAAC TGGTATTGTC AAATGGTTCA ATGACGCGAA GGGCTTCGGC TTCATCACGC CCGACGAAGG CGGCGAAGAT CTGTTTGCAC ATTTCTCGGC GATCAACATG CAGGGCTTCA AAACCCTGAA GGAAGGCCAA AAGGTCAGCT TCGAGGTAGT GCAAGGCCCG AAGGGCAAGC AAGCGTCGAA CATCCAAGCA GCTTGA
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Protein sequence | MLVVSSDCVT GEVGMATGIV KWFNDAKGFG FITPDEGGED LFAHFSAINM QGFKTLKEGQ KVSFEVVQGP KGKQASNIQA A
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