| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3167 |
|---|
| Symbol | |
|---|
| ID | 6282566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3568034 |
|---|
| End bp | 3568240 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642622741 |
|---|
| Product | cold-shock DNA-binding domain protein |
|---|
| Protein accession | YP_001896783 |
|---|
| Protein GI | 187925141 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000493488 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00220171 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG GTACGGTCAA ATGGTTCAAT GACGCAAAAG GTTTCGGATT CATCACGCCT
GACGAAGGTG GTGAGGATCT GTTTGCACAC TTCTCGGCCA TCCAGATGAA TGGGTTCAAG
ACCCTGAAGG AAGGCCAAAA GGTGACCTTC GAGGTCGTGC AAGGCCCGAA AGGCAAACAG
GCATCGAACA TCCAGGCACC TGCCTGA
|
|---|
| Protein sequence | MATGTVKWFN DAKGFGFITP DEGGEDLFAH FSAIQMNGFK TLKEGQKVTF EVVQGPKGKQ
ASNIQAPA
|
|---|
| |