Gene Rmet_5816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5816 
SymbolcspA 
ID4042680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2579327 
End bp2579530 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content57% 
IMG OID637981235 
Productmajor cold shock protein 
Protein accessionYP_587944 
Protein GI94314735 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCG GTATCGTAAA GTGGTTCAAC GACGCCAAGG GCTTTGGCTT CATCAAGCCG 
GACGCTGGCG GTGACGATCT GTTCGCTCAC TTCTCGGAAG TCCGTGCCGA CGGCTTCAAG
TCGCTGCAGG AAAACCAACG CGTGTCGTTC GAAGTCAAGA ACGGCCCGAA GGGTCTGCAA
GCAGCGAACA TCACCCCGCT GTAA
 
Protein sequence
MQTGIVKWFN DAKGFGFIKP DAGGDDLFAH FSEVRADGFK SLQENQRVSF EVKNGPKGLQ 
AANITPL