More than 300 homologs were found in PanDaTox collection
for query gene Noca_2869 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_2869  cold-shock DNA-binding protein family protein  100 
 
 
67 aa  137  6e-32  Nocardioides sp. JS614  Bacteria  normal  0.0181409  n/a   
 
 
-
 
NC_009664  Krad_0218  putative cold-shock DNA-binding domain protein  77.27 
 
 
67 aa  112  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.230692  hitchhiker  0.00399283 
 
 
-
 
NC_012669  Bcav_2426  cold-shock DNA-binding domain protein  75.76 
 
 
67 aa  112  2.0000000000000002e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.386206  normal  0.184038 
 
 
-
 
NC_007333  Tfu_0384  cold-shock DNA-binding protein family protein  75.76 
 
 
67 aa  109  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2129  cold-shock DNA-binding domain protein  74.24 
 
 
69 aa  109  2.0000000000000002e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1466  cold-shock DNA-binding domain protein  75.38 
 
 
67 aa  108  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00122582  normal 
 
 
-
 
NC_013757  Gobs_2415  cold-shock DNA-binding domain protein  75.76 
 
 
67 aa  108  3e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.751848  n/a   
 
 
-
 
NC_009921  Franean1_0560  cold-shock DNA-binding domain-containing protein  78.46 
 
 
67 aa  107  4.0000000000000004e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3652  cold-shock DNA-binding domain protein  74.24 
 
 
67 aa  107  7.000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1267  cold-shock DNA-binding domain protein  73.44 
 
 
67 aa  106  1e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.922504  n/a   
 
 
-
 
NC_011891  A2cp1_2681  cold-shock DNA-binding domain protein  76.92 
 
 
67 aa  105  2e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0114675  n/a   
 
 
-
 
NC_007760  Adeh_1274  cold-shock DNA-binding protein family protein  76.92 
 
 
67 aa  105  2e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2588  cold-shock DNA-binding domain protein  76.92 
 
 
67 aa  105  2e-22  Anaeromyxobacter sp. K  Bacteria  normal  0.110334  n/a   
 
 
-
 
NC_013093  Amir_6800  cold-shock DNA-binding domain protein  69.7 
 
 
67 aa  104  3e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4269  cold-shock DNA-binding protein family protein  75.38 
 
 
67 aa  104  4e-22  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4077  cold-shock DNA-binding domain protein  69.7 
 
 
67 aa  103  5e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.742445 
 
 
-
 
NC_013131  Caci_1900  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  103  7e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.030523  normal 
 
 
-
 
NC_013595  Sros_0143  putative cold-shock DNA-binding domain protein  74.24 
 
 
67 aa  103  7e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.113975  normal 
 
 
-
 
NC_013093  Amir_0220  cold-shock DNA-binding domain protein  73.85 
 
 
67 aa  103  8e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0073  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  103  1e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.621224  normal 
 
 
-
 
NC_013159  Svir_37160  cold-shock DNA-binding protein family  72.73 
 
 
67 aa  102  2e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0943216 
 
 
-
 
NC_009953  Sare_0948  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  102  2e-21  Salinispora arenicola CNS-205  Bacteria  normal  0.360484  normal  0.128926 
 
 
-
 
NC_008726  Mvan_1040  cold-shock DNA-binding domain-containing protein  72.73 
 
 
67 aa  102  2e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.366618  normal 
 
 
-
 
NC_011886  Achl_0641  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  101  3e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013169  Ksed_26130  cold-shock DNA-binding protein family  71.64 
 
 
67 aa  101  4e-21  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2494  cold-shock DNA-binding domain-containing protein  73.85 
 
 
67 aa  101  4e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.170049  decreased coverage  0.000196654 
 
 
-
 
NC_011145  AnaeK_3292  cold-shock DNA-binding domain protein  73.85 
 
 
67 aa  100  5e-21  Anaeromyxobacter sp. K  Bacteria  hitchhiker  0.0070619  n/a   
 
 
-
 
NC_007760  Adeh_0988  cold-shock DNA-binding protein family protein  72.73 
 
 
67 aa  100  5e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1049  cold-shock DNA-binding domain protein  72.73 
 
 
67 aa  100  5e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0472  cold-shock DNA-binding protein family protein  69.23 
 
 
67 aa  100  5e-21  Arthrobacter sp. FB24  Bacteria  normal  0.16014  n/a   
 
 
-
 
NC_011145  AnaeK_1045  cold-shock DNA-binding domain protein  72.73 
 
 
67 aa  100  5e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.396466  n/a   
 
 
-
 
NC_011891  A2cp1_3366  cold-shock DNA-binding domain protein  73.85 
 
 
67 aa  100  6e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1762  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  100  8e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00760021 
 
 
-
 
NC_009380  Strop_1775  cold-shock protein, DNA-binding  70.77 
 
 
67 aa  100  8e-21  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3605  putative cold-shock DNA-binding domain protein  71.88 
 
 
67 aa  99.8  1e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.439248 
 
 
-
 
NC_009664  Krad_3637  putative cold-shock DNA-binding domain protein  69.7 
 
 
67 aa  99.4  1e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3353  cold-shock DNA-binding domain-containing protein  67.69 
 
 
67 aa  99  2e-20  Salinispora arenicola CNS-205  Bacteria  normal  0.0827794  hitchhiker  0.00618792 
 
 
-
 
NC_009921  Franean1_6575  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  99  2e-20  Frankia sp. EAN1pec  Bacteria  normal  0.513102  normal 
 
 
-
 
NC_014151  Cfla_1580  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  99.4  2e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.507056  normal  0.495998 
 
 
-
 
NC_007777  Francci3_0260  cold-shock DNA-binding protein family protein  69.7 
 
 
67 aa  99  2e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3123  cold-shock protein, DNA-binding  67.69 
 
 
67 aa  99  2e-20  Salinispora tropica CNB-440  Bacteria  normal  0.0870951  normal  0.605091 
 
 
-
 
NC_011879  Achl_4023  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  98.2  3e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00477592 
 
 
-
 
NC_009380  Strop_0628  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.6  3e-20  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0273  cold-shock DNA-binding domain protein  70.77 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_5227  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  97.4  5e-20  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.54507  normal 
 
 
-
 
NC_007760  Adeh_0252  cold-shock DNA-binding protein family protein  70.77 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.994476  n/a   
 
 
-
 
NC_007760  Adeh_3176  cold-shock DNA-binding protein family protein  70.77 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0262  cold-shock DNA-binding domain protein  70.77 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8911  putative cold-shock DNA-binding domain protein  71.21 
 
 
66 aa  97.4  6e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4469  cold-shock DNA-binding protein family protein  67.69 
 
 
67 aa  97.4  6e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2880  cold-shock DNA-binding domain protein  68.25 
 
 
68 aa  97.1  7e-20  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000807571  n/a   
 
 
-
 
NC_013521  Sked_02480  cold-shock DNA-binding protein family  64.62 
 
 
67 aa  97.1  7e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_009675  Anae109_0273  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  97.1  8e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.355642 
 
 
-
 
NC_009675  Anae109_4042  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  97.1  8e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0573  Cold-shock protein DNA-binding protein  69.7 
 
 
67 aa  96.7  9e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2053  cold-shock DNA-binding domain protein  68.18 
 
 
67 aa  96.7  9e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  0.203977  normal  0.0111256 
 
 
-
 
NC_009077  Mjls_2334  cold-shock DNA-binding protein family protein  68.18 
 
 
67 aa  96.3  1e-19  Mycobacterium sp. JLS  Bacteria  normal  0.213577  normal  0.0207687 
 
 
-
 
NC_009675  Anae109_2532  cold-shock DNA-binding domain-containing protein  73.85 
 
 
65 aa  96.7  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.19716  normal  0.287944 
 
 
-
 
NC_009675  Anae109_4117  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  96.7  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.327381  normal  0.21845 
 
 
-
 
NC_012669  Bcav_0668  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  96.3  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.16024  normal 
 
 
-
 
NC_009338  Mflv_5230  cold-shock DNA-binding domain-containing protein  68.18 
 
 
67 aa  96.7  1e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.244858  normal 
 
 
-
 
NC_011761  AFE_0590  cold-shock protein  70.77 
 
 
67 aa  95.9  1e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  hitchhiker  0.000832642  n/a   
 
 
-
 
NC_011206  Lferr_0742  cold-shock DNA-binding domain protein  70.77 
 
 
67 aa  95.9  1e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  0.0000000000219995  unclonable  0.0000000000274746 
 
 
-
 
NC_008146  Mmcs_2295  cold-shock DNA-binding protein family protein  68.18 
 
 
67 aa  96.3  1e-19  Mycobacterium sp. MCS  Bacteria  normal  0.904352  n/a   
 
 
-
 
NC_008705  Mkms_2342  cold-shock DNA-binding protein family protein  68.18 
 
 
67 aa  96.3  1e-19  Mycobacterium sp. KMS  Bacteria  normal  normal  0.432439 
 
 
-
 
NC_011901  Tgr7_0172  cold-shock DNA-binding domain protein  67.16 
 
 
67 aa  95.5  2e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.0000163048  n/a   
 
 
-
 
NC_007760  Adeh_1235  cold-shock DNA-binding protein family protein  72.31 
 
 
66 aa  95.5  2e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2630  cold-shock DNA-binding domain protein  72.31 
 
 
66 aa  95.5  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.681724  n/a   
 
 
-
 
NC_011891  A2cp1_2724  cold-shock DNA-binding domain protein  72.31 
 
 
66 aa  95.5  2e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.720009  n/a   
 
 
-
 
NC_008825  Mpe_A2202  cold-shock DNA-binding protein family protein  72.58 
 
 
69 aa  95.5  2e-19  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.532688 
 
 
-
 
NC_008726  Mvan_5398  cold-shock DNA-binding domain-containing protein  66.67 
 
 
67 aa  95.1  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.262283  normal  0.0908383 
 
 
-
 
NC_009338  Mflv_1392  cold-shock DNA-binding domain-containing protein  66.67 
 
 
67 aa  95.1  3e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.124556  normal  0.329269 
 
 
-
 
NC_013159  Svir_29050  cold-shock DNA-binding protein family  70.77 
 
 
67 aa  94.7  3e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.415515  normal  0.771728 
 
 
-
 
NC_013947  Snas_4169  cold-shock DNA-binding domain-containing protein  67.69 
 
 
67 aa  94.4  4e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.206868  normal  0.740799 
 
 
-
 
NC_011313  VSAL_II0614  cold shock-like protein  67.69 
 
 
69 aa  94.4  5e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.099487  n/a   
 
 
-
 
NC_013131  Caci_8123  cold-shock DNA-binding domain protein  66.67 
 
 
67 aa  94.4  5e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2345  cold-shock DNA-binding domain protein  66.67 
 
 
67 aa  94.4  5e-19  Ralstonia pickettii 12D  Bacteria  normal  0.574294  normal  0.405321 
 
 
-
 
NC_010682  Rpic_2735  cold-shock DNA-binding domain protein  66.67 
 
 
67 aa  94.4  5e-19  Ralstonia pickettii 12J  Bacteria  normal  0.723886  normal  0.792546 
 
 
-
 
NC_013172  Bfae_10670  cold-shock DNA-binding protein family  67.69 
 
 
67 aa  94.4  5e-19  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00582905  n/a   
 
 
-
 
NC_014151  Cfla_0013  cold-shock DNA-binding domain protein  64.62 
 
 
67 aa  94.4  5e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1911  cold-shock DNA-binding protein family protein  71.43 
 
 
70 aa  93.6  7e-19  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.000000000206161  normal  0.143594 
 
 
-
 
NC_013595  Sros_4566  putative cold-shock DNA-binding domain protein  64.06 
 
 
67 aa  93.6  8e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.55888  normal  0.0641574 
 
 
-
 
NC_009077  Mjls_5184  cold-shock DNA-binding protein family protein  65.15 
 
 
67 aa  93.6  9e-19  Mycobacterium sp. JLS  Bacteria  normal  hitchhiker  0.00427326 
 
 
-
 
NC_008146  Mmcs_4798  cold-shock DNA-binding protein family protein  65.15 
 
 
67 aa  93.6  9e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4884  cold-shock DNA-binding protein family protein  65.15 
 
 
67 aa  93.6  9e-19  Mycobacterium sp. KMS  Bacteria  normal  0.71911  normal  0.101787 
 
 
-
 
NC_003296  RSp1053  cold shock-like transcription regulator protein  66.67 
 
 
67 aa  93.2  1e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.470883  normal 
 
 
-
 
NC_009565  TBFG_13677  cold shock protein A cspA  63.64 
 
 
67 aa  93.2  1e-18  Mycobacterium tuberculosis F11  Bacteria  normal  0.0108357  normal  0.108106 
 
 
-
 
NC_013947  Snas_6113  cold-shock DNA-binding domain-containing protein  67.69 
 
 
66 aa  92.8  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4386  cold-shock DNA-binding domain protein  67.16 
 
 
67 aa  92.8  1e-18  Ralstonia pickettii 12D  Bacteria  normal  normal  0.490734 
 
 
-
 
NC_013510  Tcur_0521  cold-shock DNA-binding domain protein  65.15 
 
 
67 aa  92.8  1e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4276  cold-shock DNA-binding domain protein  67.16 
 
 
67 aa  92.8  1e-18  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2806  cold shock proteins  70.15 
 
 
85 aa  92.4  2e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  5.72104e-21  n/a   
 
 
-
 
NC_012857  Rpic12D_3895  cold-shock DNA-binding domain protein  64.18 
 
 
67 aa  92.4  2e-18  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3782  cold-shock DNA-binding domain protein  64.18 
 
 
67 aa  92.4  2e-18  Ralstonia pickettii 12J  Bacteria  normal  0.0399631  normal  0.208523 
 
 
-
 
NC_013174  Jden_0301  cold-shock DNA-binding domain protein  63.08 
 
 
67 aa  91.7  3e-18  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.00253542  normal  0.0688177 
 
 
-
 
NC_007498  Pcar_0778  cold shock proteins  72.31 
 
 
66 aa  91.7  3e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000726747  n/a   
 
 
-
 
NC_009380  Strop_0268  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  91.7  3e-18  Salinispora tropica CNB-440  Bacteria  normal  hitchhiker  0.00110044 
 
 
-
 
NC_011662  Tmz1t_1374  cold-shock DNA-binding domain protein  65.15 
 
 
67 aa  91.7  3e-18  Thauera sp. MZ1T  Bacteria  normal  0.287556  n/a   
 
 
-
 
NC_008541  Arth_1055  cold-shock DNA-binding protein family protein  60.61 
 
 
67 aa  92  3e-18  Arthrobacter sp. FB24  Bacteria  normal  0.481948  n/a   
 
 
-
 
NC_009953  Sare_0310  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  91.7  3e-18  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000124748 
 
 
-
 
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