23 homologs were found in PanDaTox collection
for query gene VIBHAR_06809 on replicon NC_009784
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009784  VIBHAR_06809  type I restriction enzyme S subunit  100 
 
 		 90 aa  183  6e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0160  restriction modification system DNA specificity subunit  74.55 
 
 		 399 aa  77.4  0.00000000000007  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008599  CFF8240_0988  type I restriction-modification system, S subunit  58.33 
 
 		 401 aa  53.9  0.0000007  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.271922  n/a   
 
 
-
 
NC_007575  Suden_0944  restriction modification system DNA specificity subunit  57.14 
 
 		 420 aa  50.8  0.000006  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000962716  n/a   
 
 
-
 
NC_009135  MmarC5_0615  restriction modification system DNA specificity subunit  53.06 
 
 		 417 aa  49.7  0.00001  Methanococcus maripaludis C5  Archaea  normal  0.0545068  n/a   
 
 
-
 
NC_008043  TM1040_3550  restriction modification system DNA specificity subunit  50 
 
 		 417 aa  49.3  0.00002  Ruegeria sp. TM1040  Bacteria  normal  0.257959  normal  0.256697 
 
 
-
 
NC_009719  Plav_2346  restriction modification system DNA specificity subunit  48.94 
 
 		 392 aa  47  0.00008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.104931  normal  0.0105772 
 
 
-
 
NC_013216  Dtox_4260  hypothetical protein  54.35 
 
 		 287 aa  47  0.0001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_2852  restriction endonuclease S subunits-like protein  47.83 
 
 		 412 aa  45.8  0.0002  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0584008 
 
 
-
 
NC_012917  PC1_0864  restriction modification system DNA specificity domain protein  45.45 
 
 		 413 aa  44.3  0.0006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0689213  n/a   
 
 
-
 
NC_009616  Tmel_0403  restriction modification system DNA specificity subunit  47.17 
 
 		 402 aa  44.3  0.0006  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_0006  type I restriction-modification system, S subunit, EcoA family  40 
 
 		 435 aa  43.1  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_04450  restriction modification system DNA specificity domain protein  41.51 
 
 		 422 aa  43.1  0.001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_2904  restriction modification system DNA specificity subunit  43.4 
 
 		 425 aa  42.4  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2673  restriction modification system DNA specificity subunit  47.83 
 
 		 415 aa  42.4  0.002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.574489 
 
 
-
 
NC_011901  Tgr7_1778  type I restriction-modification system specificity subunit  56.82 
 
 		 419 aa  42.7  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.926504  n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  35.63 
 
 		 425 aa  42  0.003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0951  restriction modification system DNA specificity subunit  50 
 
 		 419 aa  41.6  0.003  Psychrobacter cryohalolentis K5  Bacteria  normal  1  unclonable  0.0000406123 
 
 
-
 
NC_009665  Shew185_2194  restriction modification system DNA specificity subunit  41.3 
 
 		 427 aa  42  0.003  Shewanella baltica OS185  Bacteria  normal  0.122675  n/a   
 
 
-
 
NC_002967  TDE0368  type I restriction-modification system, S subunit, putative  41.82 
 
 		 562 aa  41.6  0.003  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4622  Restriction endonuclease S subunits-like protein  42.55 
 
 		 411 aa  41.6  0.004  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.156513 
 
 
-
 
NC_008740  Maqu_2391  restriction modification system DNA specificity subunit  46.15 
 
 		 374 aa  41.2  0.005  Marinobacter aquaeolei VT8  Bacteria  normal  0.164769  n/a   
 
 
-
 
NC_002977  MCA1890  type I restriction-modification system, S subunit  44 
 
 		 416 aa  40.4  0.008  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
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