| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2194 |
|---|
| Symbol | |
|---|
| ID | 5370974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2614480 |
|---|
| End bp | 2615763 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640830407 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_001366397 |
|---|
| Protein GI | 153000716 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.122675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA CTATAAATCA AGTGACTCCT GAAGGGTATA AACAAACTGA GGTCGGGGTT
ATTCCTGAAG ATTGGGAAGT AAAAAAGCTC AAAGAAATTT CTCCATCACA AAGTGTGGGT
CTAGTAATCA ATCCATCTTC CTATTATTCA AATAGTGGAA CTATACCAAT GTTGGTCGGT
TCCCATGTTT TTGAAAATAA AATTAAGTGG AGCAAAGCAA ATAAGATCAC GGCAGAAAGC
AATTTAAGGT TACCTGCTTC ACGCTTAAAA ACAGGTGACT TAGTAACTGT AAGGGTTGGG
GAGCCGGGGA TTACAGCAGT TGTTCCTCCA GAATTGAATC AATCGAATTG TGCTTCAATG
ATGATCATTC GGCAAGGGCC AAAATTTGAT TCTCATTGGC TTTGCTTTTT AATGAATTCG
AAGATAGGAA AATCAAGAAT TGAAGGTGTT CAATACGGTA CTGCACAGAA GCAGTTCAAT
ATCATCGATG CTGTTGATTT TCTTTTCCCT TTCCCAACAA AAGAAGAGCA AACCGCCATT
GCCAATGCTT TATCAGATAT GGATGCTTTG CTGAGTGAGT TAGAAAAACT CATTGCCAAA
AAACAAGCGA TAAAAACCGC CACCATGCAG CAACTGCTCA CCGGCAAAAA CCGTTTACCG
CAGTTTGCCT TTTATTCCGA TATTAACAGT ATAGAAGGTG CTGTCGAAGG TAAGCGTAAA
GGTACAAAAC CCAGCGAGCT AGGCGAAATT CCAGATGATT GGGAGGTGAA AAAATTTGGT
CAAGTAATGC ATATCAGACA TGGCAAAGAT CAAAAATCTA TACAAGTTAG CGGTGGTTTA
TATCCCATTT TTGGAACTGG GGGACAAATG GGTTCAACGA ATACTCCTCT TTATGATAAG
CCCTCTGTAC TTATAGGGCG AAAAGGAACA ATCAATAAAC CTCGGTTTAC TGATTATCCA
TTTTGGACAG TTGATACACT GTTTTACTCT GAAGTAGCAA ATACAGAATC TGTTAAATTT
ATTTACTACA AGTTCTGTAT GATAGATTGG ATGCAATACA ATGAAGCCTC GGGAGTACCG
AGCTTAAACG CTAGTACAAT CGAAAATGTA TTAGCTTCAT TTCCTGATAT TAAAGAACAA
ACCGCTATCG TCACGATCCT CTCGGATATC GATAATGAAA TCCAAGCCTT TGAACAACGC
TTAAGCAAAA CCCGACAAAT TAAACAAGGT ATGATGCAAG AATTGCTCAC GGGTAAAACT
CGTTTACCAC TTGGCACAAA TTAA
|
|---|
| Protein sequence | MSQTINQVTP EGYKQTEVGV IPEDWEVKKL KEISPSQSVG LVINPSSYYS NSGTIPMLVG
SHVFENKIKW SKANKITAES NLRLPASRLK TGDLVTVRVG EPGITAVVPP ELNQSNCASM
MIIRQGPKFD SHWLCFLMNS KIGKSRIEGV QYGTAQKQFN IIDAVDFLFP FPTKEEQTAI
ANALSDMDAL LSELEKLIAK KQAIKTATMQ QLLTGKNRLP QFAFYSDINS IEGAVEGKRK
GTKPSELGEI PDDWEVKKFG QVMHIRHGKD QKSIQVSGGL YPIFGTGGQM GSTNTPLYDK
PSVLIGRKGT INKPRFTDYP FWTVDTLFYS EVANTESVKF IYYKFCMIDW MQYNEASGVP
SLNASTIENV LASFPDIKEQ TAIVTILSDI DNEIQAFEQR LSKTRQIKQG MMQELLTGKT
RLPLGTN
|
|---|
| |