Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0006 |
Symbol | |
ID | 1181614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 8861 |
End bp | 10168 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637391386 |
Product | type I restriction-modification system, S subunit, EcoA family |
Protein accession | NP_789868 |
Protein GI | 28867249 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGTAA TTGGCGATTT TGTAACTGCG CTGCAAGCAG GTGTTAGCGT CAATGCTTTT GAAACTGACT CTGGCTGCAC AGAGGGCGAG CTTGGTGTGC TGAAGACCAG TGCTGTACTC CGTGGTAGAT TTTTTGCGGA GCAGTACAAG GTAGTCGTCG CGGAAGACAT GGGAAGAGTG GCAACAAGCG TTGTCGGAGA CCGGATCATC ATCAGTCGCA TGAATACTCC TGCGCTTGTT GGTGAGTCAG GCTATGTGAC AAAGGATGAG CCCAATCTCT TCCTACCTGA TCGCCTTTGG CAAACTGAGC CTTCAGACCG TCCACACTCA CAGCGTTGGC TGTCTTACTG GTTGCAGCAT CCTGGGGTTC GCCGATTGAT TGCTGCCAGT GCAACTGGCA CCAGCAACAG CATGAAGAAC ATCTCGAAAG AGACAGTGTT GTCGCTGCCT GTTCCTCGTA CCCCACTGCC CGAACAACAA AAGATCGCCG CCATCCTCAC TGCGGTTGAC GATAAGTTGG ACGTAATTTT CCGTCAGATT AAAGCCACAC AGGCTCTGAA ACAGGGCCTG ATGCAAGCCC TGTTCAGCCG GGGCGTGGGT ACCCAAGATA CTACTGGTCG TTGGATTCAG CATACCGAGT TCAAGGACAG TGAACTCGGC ACGATTCCAG CGCTATGGGA TGTTGGCGTG ATAGCGGATT ACGTATCAGC TCTTCGTTCA GGGGTCAGTG TTAACGCAGA AGATCGTATG CATGGTGATG ATGAGATCGG TGTCCTCAAG GTGAGTTGCG TACTCCGTGG TGGGTTCTAT CCAAATTGTC ATAAGACAGT TGTCCCCGAG GAGCGAGAGC GCGTCGCTGA GCCCGTTTTA CAGGGACGTA TTATCGTCAG TCGAGCGAAC ACTCCTGCAT TAGTCGGTGA ATCAGCGTAT GTCAATTCTG CGTGGCCCAA CTTGTTTCTC CCAGACAAAC TCTGGCAAAT CGAGCCCTCT GAAAGCCCCC ATTCGATAAA GTGGCTGTCT TTTTATTTGC AGTCACCATT TGTTCGTCAA GAAATCAGTA AGGCAGCAAC GGGCACAAGT GGCAGCATGA AGAACATCTC CAAGCCAGCA TTTTTAAGCA TTCGGATGCC TTTAGTACCG CTAGCTGAGC AAGAGCACAT TGCAGCGATT CTTTCTGACG TTACATCCAA AATTGAAGCC TTGAACAGTA AGCAAAACCA TTTCCAAACC CTCAAACGCG GGCTGATGCA AAAACTGCTA ACCGGCGAAT GGCGGGTCAA GATCGATAGC CCTACCGGTA CGGTCTGA
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Protein sequence | MGVIGDFVTA LQAGVSVNAF ETDSGCTEGE LGVLKTSAVL RGRFFAEQYK VVVAEDMGRV ATSVVGDRII ISRMNTPALV GESGYVTKDE PNLFLPDRLW QTEPSDRPHS QRWLSYWLQH PGVRRLIAAS ATGTSNSMKN ISKETVLSLP VPRTPLPEQQ KIAAILTAVD DKLDVIFRQI KATQALKQGL MQALFSRGVG TQDTTGRWIQ HTEFKDSELG TIPALWDVGV IADYVSALRS GVSVNAEDRM HGDDEIGVLK VSCVLRGGFY PNCHKTVVPE ERERVAEPVL QGRIIVSRAN TPALVGESAY VNSAWPNLFL PDKLWQIEPS ESPHSIKWLS FYLQSPFVRQ EISKAATGTS GSMKNISKPA FLSIRMPLVP LAEQEHIAAI LSDVTSKIEA LNSKQNHFQT LKRGLMQKLL TGEWRVKIDS PTGTV
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