Gene PSPTO_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0006 
Symbol 
ID1181614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp8861 
End bp10168 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content51% 
IMG OID637391386 
Producttype I restriction-modification system, S subunit, EcoA family 
Protein accessionNP_789868 
Protein GI28867249 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGTAA TTGGCGATTT TGTAACTGCG CTGCAAGCAG GTGTTAGCGT CAATGCTTTT 
GAAACTGACT CTGGCTGCAC AGAGGGCGAG CTTGGTGTGC TGAAGACCAG TGCTGTACTC
CGTGGTAGAT TTTTTGCGGA GCAGTACAAG GTAGTCGTCG CGGAAGACAT GGGAAGAGTG
GCAACAAGCG TTGTCGGAGA CCGGATCATC ATCAGTCGCA TGAATACTCC TGCGCTTGTT
GGTGAGTCAG GCTATGTGAC AAAGGATGAG CCCAATCTCT TCCTACCTGA TCGCCTTTGG
CAAACTGAGC CTTCAGACCG TCCACACTCA CAGCGTTGGC TGTCTTACTG GTTGCAGCAT
CCTGGGGTTC GCCGATTGAT TGCTGCCAGT GCAACTGGCA CCAGCAACAG CATGAAGAAC
ATCTCGAAAG AGACAGTGTT GTCGCTGCCT GTTCCTCGTA CCCCACTGCC CGAACAACAA
AAGATCGCCG CCATCCTCAC TGCGGTTGAC GATAAGTTGG ACGTAATTTT CCGTCAGATT
AAAGCCACAC AGGCTCTGAA ACAGGGCCTG ATGCAAGCCC TGTTCAGCCG GGGCGTGGGT
ACCCAAGATA CTACTGGTCG TTGGATTCAG CATACCGAGT TCAAGGACAG TGAACTCGGC
ACGATTCCAG CGCTATGGGA TGTTGGCGTG ATAGCGGATT ACGTATCAGC TCTTCGTTCA
GGGGTCAGTG TTAACGCAGA AGATCGTATG CATGGTGATG ATGAGATCGG TGTCCTCAAG
GTGAGTTGCG TACTCCGTGG TGGGTTCTAT CCAAATTGTC ATAAGACAGT TGTCCCCGAG
GAGCGAGAGC GCGTCGCTGA GCCCGTTTTA CAGGGACGTA TTATCGTCAG TCGAGCGAAC
ACTCCTGCAT TAGTCGGTGA ATCAGCGTAT GTCAATTCTG CGTGGCCCAA CTTGTTTCTC
CCAGACAAAC TCTGGCAAAT CGAGCCCTCT GAAAGCCCCC ATTCGATAAA GTGGCTGTCT
TTTTATTTGC AGTCACCATT TGTTCGTCAA GAAATCAGTA AGGCAGCAAC GGGCACAAGT
GGCAGCATGA AGAACATCTC CAAGCCAGCA TTTTTAAGCA TTCGGATGCC TTTAGTACCG
CTAGCTGAGC AAGAGCACAT TGCAGCGATT CTTTCTGACG TTACATCCAA AATTGAAGCC
TTGAACAGTA AGCAAAACCA TTTCCAAACC CTCAAACGCG GGCTGATGCA AAAACTGCTA
ACCGGCGAAT GGCGGGTCAA GATCGATAGC CCTACCGGTA CGGTCTGA
 
Protein sequence
MGVIGDFVTA LQAGVSVNAF ETDSGCTEGE LGVLKTSAVL RGRFFAEQYK VVVAEDMGRV 
ATSVVGDRII ISRMNTPALV GESGYVTKDE PNLFLPDRLW QTEPSDRPHS QRWLSYWLQH
PGVRRLIAAS ATGTSNSMKN ISKETVLSLP VPRTPLPEQQ KIAAILTAVD DKLDVIFRQI
KATQALKQGL MQALFSRGVG TQDTTGRWIQ HTEFKDSELG TIPALWDVGV IADYVSALRS
GVSVNAEDRM HGDDEIGVLK VSCVLRGGFY PNCHKTVVPE ERERVAEPVL QGRIIVSRAN
TPALVGESAY VNSAWPNLFL PDKLWQIEPS ESPHSIKWLS FYLQSPFVRQ EISKAATGTS
GSMKNISKPA FLSIRMPLVP LAEQEHIAAI LSDVTSKIEA LNSKQNHFQT LKRGLMQKLL
TGEWRVKIDS PTGTV