16 homologs were found in PanDaTox collection
for query gene Spea_1885 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_1885  MscS mechanosensitive ion channel  100 
 
 		 296 aa  601  1.0000000000000001e-171  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
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NC_009092  Shew_2145  MscS mechanosensitive ion channel  54.3 
 
 		 537 aa  314  9.999999999999999e-85  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000018711  normal  1 
 
 
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NC_010506  Swoo_1943  MscS mechanosensitive ion channel  50.86 
 
 		 533 aa  305  6e-82  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000658199  decreased coverage  0.00758396 
 
 
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NC_008700  Sama_1578  small-conductance mechanosensitive channel  47.52 
 
 		 534 aa  291  6e-78  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.00006998  normal  1 
 
 
-
 
NC_003910  CPS_0969  mechanosensitive ion channel family protein  32.2 
 
 		 554 aa  146  4.0000000000000006e-34  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_007958  RPD_4048  MscS mechanosensitive ion channel  29.84 
 
 		 569 aa  93.2  5e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.138882  normal  0.12233 
 
 
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NC_007778  RPB_4194  MscS mechanosensitive ion channel  26.59 
 
 		 562 aa  81.3  0.00000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.674763 
 
 
-
 
NC_011004  Rpal_4873  MscS Mechanosensitive ion channel  26.38 
 
 		 567 aa  80.1  0.00000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_1446  MscS mechanosensitive ion channel  26.41 
 
 		 648 aa  69.3  0.00000000008  Psychrobacter cryohalolentis K5  Bacteria  normal  0.770596  normal  1 
 
 
-
 
NC_007204  Psyc_0970  small-conductance mechanosensitive ion channel  25.83 
 
 		 650 aa  68.6  0.0000000001  Psychrobacter arcticus 273-4  Bacteria  normal  1  hitchhiker  0.00371389 
 
 
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NC_014230  CA2559_10518  MscS Mechanosensitive ion channel  22.36 
 
 		 591 aa  67.8  0.0000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.526339  n/a   
 
 
-
 
NC_009524  PsycPRwf_1650  MscS mechanosensitive ion channel  25.33 
 
 		 570 aa  53.9  0.000003  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.598293 
 
 
-
 
NC_009441  Fjoh_3200  MscS mechanosensitive ion channel  21.22 
 
 		 590 aa  48.9  0.0001  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_1004  MscS mechanosensitive ion channel  22.99 
 
 		 648 aa  43.5  0.004  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0783  MscS mechanosensitive ion channel  22.9 
 
 		 571 aa  43.1  0.005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_2527  MscS mechanosensitive ion channel  26.54 
 
 		 566 aa  42.4  0.01  Jannaschia sp. CCS1  Bacteria  normal  0.131998  normal  0.145786 
 
 
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