| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1650 |
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| Symbol | |
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| ID | 5205658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2038751 |
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| End bp | 2040463 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640599873 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001280540 |
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| Protein GI | 148653447 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.598293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTT TTGAGAAACG TGATATTTCC AGCTCAGCTA ACTCAGTCAG CCTGCAGCCT
ATGAAGCTGC TCAGTGTAAC ACTGGGGATA ATATTGGCAC TTATGCTATC CCTACTATCG
GTGACTGCGA CAGCAGCTGA TGAAGCCAGT GATACAGCCC CGAGCGCAGA AGAAGTCGTT
GACCCTTTTG GTCGACAGAC GCCACGCAGT ACAGTGCAAG GCTTCATTAA GTCATTAGCC
GAAAACAATG CGTCATTAGC CGCTAATTAT CTAAGCTTAG ATGCCGGAGA GAACTCAGTA
GAGGCCGTGC GTCAGGTAAA GCTTGCATTA GACATGGGGG GACGCCTAGA CGCTGAGCTG
CAGATTAATA ATACCCCTTC GGGTAATTTT GCCGATCAGT TGCCACCGAC CTTAGAGAAG
GTGGGCACCA TTACCGCTCA AGATCAAGTG ATTGATATTG TACTGGCAAG AAAGACTTCA
GAGCATGGTA ATCAGTACTG GCAGATCTCT AATGAAACGT TGCAGGCCAT AAAAAAATCA
GATATTTCAG CCAATCCCTC AATCATTGAT AAGTACACGC TCAAGCCGCT GCAAGATAAA
ATGATTGGTG GTTATAACTT GGCCGATATC TTTGCGGTGT TTTTGTTGGC GTTATTCTGT
ATAGCCGCCT CATATGTGTT CTTCGCTGTG TTGTATTTTA TTTTTAAAGT TTTCTATCCC
AAAGTACGTA ATAAGCCGCT ACCGATAGAT ATTAAGTTTG TGTTACCACT GGCCTTGGTC
ATGACCTCGC TGATTTTATA TGAGGTGATG GTGTATGCTG GGGTTTCGGT AACAGTGCGA
GAGCCGGTGA ACCGTATTAA GGATATTGTG GGCTGGTTTG CCTCAACGTG GCTACTGCTC
AGAGTGGTCG ATGCCATTTT CAGTCGTGCA GAGCGTCAAA GTTATAAGCG CAATCAGACT
GAACGCGTAT CGATTTTAAG CTTACTGCAC AAAATTATTA AGACAGTGCT GTTAATATTA
GCCTGTATCT TCATTTTTGG TAATTTAGGT TTTGATTTAA CCACAGGGAT TGCAGCACTG
GGGGTCGGTG GTTTGGCCTT GGCCCTAGGT GCGCAAAAGA TGATTGAAAA CTTGGTCGGT
AGTGTGGTGG TGGTAGCAGA CCAGCCAGTG CGTGTCGGTG ACTATTGTAA GTTTGGTTCG
CTAGAAGGCA CGGTCGTAGA CATCGGTATT CGTTCCACTC GACTGCGCAC CTTAAACCGT
ACCATTGTGA CAGTGCCTAA CGGCGAGTTT TCCTCTATGT CGATTGAAAA CTTTGCCTCC
CGTGATATGT TTCACTTTTT GCATAATATT TATATTAAAC GCGATGTGGC GACCTCCACG
TTGGAGAAGT TTTTAAAAGA GATGGAGGAG TTCTTAGTTA ACCATGAAGT CACCAACTCT
GAATGGACCC AGGTAAGAAT TTCAGAGCTG CGTCAGGACT CTATGGTGAT AGAATTCCGT
GCCTATATTT ATGCCAGCGG CGCTGATGAG TTTTATGACA AACAGACTCA GTTGCTAATT
GAAATCTTAA AAGAGATAGA AACGTATCCT GTTGAGCATG CGTTAGCCAC GCAAAAAATG
ATTGTAGAGT CCTCTGATGC TAATAAAGAT AACGCATCAT CTAAAGACAG CCCAACTGCT
GCTCTTCAAA GTCATCATGA TACAGAAGAG TAG
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| Protein sequence | MLFFEKRDIS SSANSVSLQP MKLLSVTLGI ILALMLSLLS VTATAADEAS DTAPSAEEVV
DPFGRQTPRS TVQGFIKSLA ENNASLAANY LSLDAGENSV EAVRQVKLAL DMGGRLDAEL
QINNTPSGNF ADQLPPTLEK VGTITAQDQV IDIVLARKTS EHGNQYWQIS NETLQAIKKS
DISANPSIID KYTLKPLQDK MIGGYNLADI FAVFLLALFC IAASYVFFAV LYFIFKVFYP
KVRNKPLPID IKFVLPLALV MTSLILYEVM VYAGVSVTVR EPVNRIKDIV GWFASTWLLL
RVVDAIFSRA ERQSYKRNQT ERVSILSLLH KIIKTVLLIL ACIFIFGNLG FDLTTGIAAL
GVGGLALALG AQKMIENLVG SVVVVADQPV RVGDYCKFGS LEGTVVDIGI RSTRLRTLNR
TIVTVPNGEF SSMSIENFAS RDMFHFLHNI YIKRDVATST LEKFLKEMEE FLVNHEVTNS
EWTQVRISEL RQDSMVIEFR AYIYASGADE FYDKQTQLLI EILKEIETYP VEHALATQKM
IVESSDANKD NASSKDSPTA ALQSHHDTEE
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