| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4194 |
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| Symbol | |
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| ID | 3912002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4766136 |
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| End bp | 4767824 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886098 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_487797 |
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| Protein GI | 86751301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.674763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGAT CGCTGCTTCT TGTTTGGGCA ATATTGGGAA CGAGCGTCGC GTTTGCGCAG
ATCCCGGCAC CGAACGGGAA CGGCAACGGC AGTCCTCCCG CCAAGGCGGA GGAGAAGCCC
GCCGATCCGC TCGGCCGCGA TACGCCGGCC GGTATGGTCA CCGGCTTTAT CGATGCCGCC
GCCGAGCAGA ATTATGACAA GGCCGCGCAA TATCTCGATC TCAGCCAGGA GAAGGGCGCC
TGGGGGCCGA GCGTCGCGCA GCAGCTGCAG CGCATTCTCG ACCAGGGCGG CTACGTGTTT
TCGCGGTTGC GGCTGAGTGC GGATGCCGCC GGTGACCAGG ACGACGGACT TGCGCCGGAT
CAGGACAAGT TCGGTGCCGT GCGCACCGAT CACGGCAGCG TCGATCTGAT CGCGCAGCGG
GTCGACGGCA AGGACGGCGT CAAGATTTGG CTGGTGTCGG CGCGGACGGT CGGTGAGCTG
CCGGCGCTGT CGCGCACGGT GACGTCGAGC CTGGTCGACA GGATCCTGCC CTATGCGCTC
CGCGACGAAT ACCGGCTCGC CGGCGTTCCG GCGGGCCACT GGCTGGCCGT CATCGTGCTC
GCGGTGCTGA CATTTTCGAT CGTGTGGGCG ATCACCGCCG CGATCCTCTG GGTGGTCTTC
CGCTTTCGCG GCCCGGAGTC CCGCATCAGT CGCGTGCTGA GCGCCTCGGC GCTGCCGATC
CGGCTGTTCT TCACCGCGAT GTTGCTGCGC ATCGCGCTGG TGCTGACCGG CGTGGCGATC
GTCGCGCGCC AGCACATGTC CGGCGCCACC GAACTGCTCG GCTGGATCGC GCTGTCCTGG
ATCGTCTGGC GGGTGGTCGA CGCGCTGGCC GAATTCGCCA TCGCCCGGAT GACGCTGCGC
GGCCGGCTGT CGATGCTGTC GGCGGTGACC TTCATCCGGC GCAGCGTCAA GTTCGCGCTG
ATCGCTTTCG CGGCGATCGC CGGGCTCAAC GCGCTGGGCT ACAATGTCAC CGCGGGTCTC
GCCGCTCTGG GCATCGGCGG TATCGCGATC GCGCTCGGCG CGCAGAAGAC CATCGAACAT
CTGGTCGGCA GCCTGACTCT GGTGACCGAT CAGCCGATGC GGGTGGGCGA TTTCTGCAAA
TTCGGCGAGA CGATGGGCAC GATCGAGGAC ATCGGCATGC GCTCGACCCG GATTCGGACC
CTCGACCGCA CCCTGGTCAC CGTGCCGAAC GGCGCGCTGG CCGCGGTGCA GATCGAGAAC
TTCAGCCGCC GGGACAAGTT CTGGTACCAC CCGATTCTGG ACCTGCGCTA CGAGACCACG
CCGGACCAGA TGCGCGGCCT GATCGCGGCG ATCCGCGAGA TGCTGCTGGA GCATCCGAAG
GTCGACAACG ACCCGGCGCG GGTGCGGCTG CTCGGCTTCG GGTCGAATTC GCTGCGGGTC
GAAATCTTCG CCTACATCCA CGCCGTGAGC ATGGATGAGT TCCTGGAAGT GCAGGAAGAT
CTGACTCTGA GGCTGATGGA ATTGGTCGAG GCGGCGGGGA CCGGCTTCGC CTTCGCGTCG
CAGACCGTCT ATTTCGCGCG GGACAAAGCT CCGTCGTCGG GCCGCTCGCC GGCTCTCGCG
CCGGCGGACC ACCCGGACGG CGATAGCGCC GCGTCGCAGC ATCGCGCGGG CGCCGCTGCT
CGCACCTGA
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| Protein sequence | MFRSLLLVWA ILGTSVAFAQ IPAPNGNGNG SPPAKAEEKP ADPLGRDTPA GMVTGFIDAA
AEQNYDKAAQ YLDLSQEKGA WGPSVAQQLQ RILDQGGYVF SRLRLSADAA GDQDDGLAPD
QDKFGAVRTD HGSVDLIAQR VDGKDGVKIW LVSARTVGEL PALSRTVTSS LVDRILPYAL
RDEYRLAGVP AGHWLAVIVL AVLTFSIVWA ITAAILWVVF RFRGPESRIS RVLSASALPI
RLFFTAMLLR IALVLTGVAI VARQHMSGAT ELLGWIALSW IVWRVVDALA EFAIARMTLR
GRLSMLSAVT FIRRSVKFAL IAFAAIAGLN ALGYNVTAGL AALGIGGIAI ALGAQKTIEH
LVGSLTLVTD QPMRVGDFCK FGETMGTIED IGMRSTRIRT LDRTLVTVPN GALAAVQIEN
FSRRDKFWYH PILDLRYETT PDQMRGLIAA IREMLLEHPK VDNDPARVRL LGFGSNSLRV
EIFAYIHAVS MDEFLEVQED LTLRLMELVE AAGTGFAFAS QTVYFARDKA PSSGRSPALA
PADHPDGDSA ASQHRAGAAA RT
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