| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0969 |
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| Symbol | |
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| ID | 3522909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 973933 |
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| End bp | 975597 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283434 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_267718 |
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| Protein GI | 71282435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC CCCAAAACTC TACTTTTTTT ATCCGTTCTT CTTTTATTTT TACCCTTTTA
TTATCTCTAC TTCTTAATAG TCAAAGTGCA TTGAGTGCTT CACCTCCTAA TAATGGTGAA
GAGGTATCCA TTAAAAAAAT GCTCGACAGT AAAGATAAAT CACAGCAAGA GCTAGAAAAA
TCGGATTATT CTGAAGATTA TAATGTTCCC AAAGATGATT TTGAACGAGG ACAACCTCGT
AGCGCTATCG GGGGATATTT ACGTGCCTTA CGCTCAGGTG ATTTAACATT AGCGACTAAT
TATTTAGATT ATCGTAACCT TTCTGACAAA ACACTCAGTG TTGGCAAGGA AGAATTGGCA
AGACAATTAG GCGTAGTATT AAATCGTACT CTTTGGGTTG ACCTTAATAG TATTAGCTCC
CGAAAAGAAG GAAGGAAAAA TGATAATTTA CCTTCTTATA GAGAGTTGGT TGGGCAGGTC
GATTATCAAG GTAACAATAT CGATGTATTA TTACAGCGAG TTCCTCGCGC GCAAGATAAA
GTTAAAATAT GGAAAATATC AAATGCTACA GTAGAGAAAA TTCCGCGTTT ATTTAAACGA
TATTCATATT CCCCTTTGGG GGAGCTCTTA GCTAAAAAAT TACCTGCGGT AGACTTGTTT
GGTGTCATGC TTTGGCAATG GCTATATTTC ATTTTGATGC TTGTGCTGTA TTATTTTATT
GCAAAAATAC TAACCTGGGT GGTCGCTTTT GCTATCAAGC GCGTTTACAA AAAAGTCTCA
AATGAAGTTT TAAGATTTAT TAAAGAGCCT TTTGCATTAT TGATAGCCGT TATTTTTGCA
CGAAATTTTC ATGATGAAGC CAATGTTACT ATTGCGCTTA GGGCAGTGAC TGAGGGAAGT
ACGCTACTGA TCATCGCTTG GTGTTGGGTG ACCTTCCGTT TTATTGATTT AATGAAAGTA
CTATTGGCAG AGAAATTCAT CGCTCAAGAT AAACCCTTAG CCGTGTACTT ACTGAGACCA
GCAGGCACAG TAATAAAGAT CATGATCTTT AGTATTGCTG CGCTGAATTG GTTAGAAAAC
CTTGGTTTTA ATGCTTCTAC TTTATTAGCG GGTCTAGGAA TTGGTGGTTT AGCCATCGCT
TTAGCCGCGC AAAAAACGGT AGAAAATATC ATTGGCGCTA TTACTTTATA TACTTCGGCT
CCTATTAGGA TTGGTAATTT CTGTCGATTT GGTAATAGTT TAGGTGTAGT AGAGGAAATT
GGTTTACGCG CTACGCGTAT TCGTACGATA GATAGAAGTG TTATTTATGT CGCAAATGCG
AAATTTATTG ATATGAATAT AGAGAATTAC TCAGAACGTG AAAAAATGGC CTTTAAACCT
AAGATTTTCT TAGCACCGGA TACGCCAAAG GAAAATATTG ATGCGCTACT TGTAGCCATT
AGGGGCATGC TCAGCTCTAC CGACAGCCTT GCCGCATCGC CATTACGTAG CCATTTCAAA
GCGTATACTA TCTATGGATT AGAATTAGAT GTTTTTGCTT ATGTTAACAC GACCGATTTC
GATGTCTTTT TAGATGAAAT CAACCAACTC AATCTGAATA TTTTGGCTTT ACTCAATGAA
CATGATTGTA AAGTACAAGT GATCTCAGAA AGAGTTGTCG AATAA
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| Protein sequence | MKLPQNSTFF IRSSFIFTLL LSLLLNSQSA LSASPPNNGE EVSIKKMLDS KDKSQQELEK
SDYSEDYNVP KDDFERGQPR SAIGGYLRAL RSGDLTLATN YLDYRNLSDK TLSVGKEELA
RQLGVVLNRT LWVDLNSISS RKEGRKNDNL PSYRELVGQV DYQGNNIDVL LQRVPRAQDK
VKIWKISNAT VEKIPRLFKR YSYSPLGELL AKKLPAVDLF GVMLWQWLYF ILMLVLYYFI
AKILTWVVAF AIKRVYKKVS NEVLRFIKEP FALLIAVIFA RNFHDEANVT IALRAVTEGS
TLLIIAWCWV TFRFIDLMKV LLAEKFIAQD KPLAVYLLRP AGTVIKIMIF SIAALNWLEN
LGFNASTLLA GLGIGGLAIA LAAQKTVENI IGAITLYTSA PIRIGNFCRF GNSLGVVEEI
GLRATRIRTI DRSVIYVANA KFIDMNIENY SEREKMAFKP KIFLAPDTPK ENIDALLVAI
RGMLSSTDSL AASPLRSHFK AYTIYGLELD VFAYVNTTDF DVFLDEINQL NLNILALLNE
HDCKVQVISE RVVE
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