| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1004 |
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| Symbol | |
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| ID | 4033817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1199764 |
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| End bp | 1201710 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637973469 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_580269 |
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| Protein GI | 93005832 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTC CTTTCGGATT TCTCAGGACT CACTCTCTAC AGTCTCATGC CCAGTTTCTA
TCGCGACTGC TCTTTATAAT TGGCAGCTTA TTTATCCTAT TAAATATGGC GTGCATTTCT
GCTTATGCAG CAAGCAGTAC TGAGGAAATA GACAGTCGAA ATATTGAAGA GACAGTTACT
ACAAAACCGG AAAATTTGGT TGAGTATGCT GCGCAAAGAA TCGACAAGTT AAAAGAGGAA
GGAGTGACTG TCTCTGCCGT TGCAGCAGAG GTAATTAGCC CGCTAGAAAA AAGGACAGTG
CAGCAAGCAG GTGTGCTACA AGGAGATTCT GGTCTCACTG GTGATTACAG CGAAAACTAC
TATGCGTTAG ATAAGCTCAA TGCAGGTTTG CCGCCCTTGT CTGAGCCGCC AAACTTGTCA
ACCCCACTTG CCACATTAGA GTTTTTCCAA TCGGCAGTCA TGAAGCAGCA ATATGATTTG
GCAGCTTATG CACTAAATAT GAACTTGATT GATAGAGAAT CACAGTCGAA TCAAGCAATG
GATTTGGTCA AACAGCTTGA TTTTTTATTG GTTGAAAAGC AGCTATATGT GTTTGATAAG
TTGCCTGATC GTCCTGATGG CTTGATTGAA CCGCCGCTTG GCAGTACGAG CAGCATTCAA
GGGATTCCTA GACGTTCTAT TCAGCTTGGT TATATTGATT ATCGCGAGCG CCGAGTACCC
TTGCATCTAG AGCGTGTACG TATTGATAAT GGGGCGCCTT TTTGGGTATT TTCAGCGCAG
ACGGTGGCAA ATATTGATAA GCTTTATGAA CAATATCATC CGGCAAAGTT TGAGCGATAT
CTGCCTAGTT GGACCAAGCT AAAGCTTTTT AATATTGCTA TCTGGGAGTT TTTAGCGTTA
TTTATATTCT TCTCCTTTAC CATGGGCATT GGCTGGCTGC TAAGTACTGC CGCTGGCAAG
CTCCTCAATT GGTATGTCAT GGATAAAGAA GGCAACCGTC TTGGCACCCT TCATCACAAC
GGTGTAGAGG ATTTGGTCAA TAAGCTGACG GTCCCTCTAA CCTTTACCAT CAGCTTCTCA
TCGGTATTTA CCTTGGTATC GGGCGGCTTC CCTTACTTGG ATGCAGTCGC TTCCTCTATA
CGTCCGATTA TTTGGATTGG ATTGGTCTTT AGCGCCATGT GGCTCGGTAT ACGTGTTATC
AACTTTTTTG CCAACCGCTA TCAAGATATG CAGATTGAAA ATCTAGGAGA GGAGCAGTTT
GACAAAGTGC GCCGTCGTCG AACTTACGTA TCGATATTTC GTCGCGTCTT CGTATTTGTC
ATGGTGTTGG GCAGTATTTG GATAGGTCTG AGTGAGTTTG CCAACATGGA AGGCTTTGGT
AAAACCTTAC TGACTTCGGC TGGCATTGCT GGCGTGGTCA TTGGTATCGC CGCTCAACCA
ATATTGGGTA ACATCATTGC TGGAGTACAG GTAGCAGTGA CCCAGCCCGT ACGAATTGGC
GACAGTGTGA TAATGGATGG CAACTTTAGT ACCGTTGAAG ACCTGCGTTA CACTTATGCG
GTACTAAAAA CATGGGATGA ACGTCGATTA ATCGTGCCGA TGCGCGAATT GATCACCGAA
ATGGTAGAGA ACTGGTCGCA TACAGAAGTA CATCAGACCT GTCCTGTGTT CTTATATATC
GATTACGGCG CAGATATTGA CGCCATTCGG CAGCAGTTTA TTTCGGTGGT GAAAGACAAC
AAGCTTTGGG ACAACAAGAC TGAGCCTGAA ATATTTGTCG TTGAGGTAAC TGAAAAGACC
ATTCAACTGC GTGGCGCTGT TTCAGCGGTA GGCCCTGTAG AAGCATGGAC ACTGGCCTGT
GAGATACGTG AGCAGATGCT TGATTATTTG TACCGTGAAC AAAAGCATTA TTTACCAGCT
GAGCACCTTG TATTGAGACA AAAATAG
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| Protein sequence | MQTPFGFLRT HSLQSHAQFL SRLLFIIGSL FILLNMACIS AYAASSTEEI DSRNIEETVT
TKPENLVEYA AQRIDKLKEE GVTVSAVAAE VISPLEKRTV QQAGVLQGDS GLTGDYSENY
YALDKLNAGL PPLSEPPNLS TPLATLEFFQ SAVMKQQYDL AAYALNMNLI DRESQSNQAM
DLVKQLDFLL VEKQLYVFDK LPDRPDGLIE PPLGSTSSIQ GIPRRSIQLG YIDYRERRVP
LHLERVRIDN GAPFWVFSAQ TVANIDKLYE QYHPAKFERY LPSWTKLKLF NIAIWEFLAL
FIFFSFTMGI GWLLSTAAGK LLNWYVMDKE GNRLGTLHHN GVEDLVNKLT VPLTFTISFS
SVFTLVSGGF PYLDAVASSI RPIIWIGLVF SAMWLGIRVI NFFANRYQDM QIENLGEEQF
DKVRRRRTYV SIFRRVFVFV MVLGSIWIGL SEFANMEGFG KTLLTSAGIA GVVIGIAAQP
ILGNIIAGVQ VAVTQPVRIG DSVIMDGNFS TVEDLRYTYA VLKTWDERRL IVPMRELITE
MVENWSHTEV HQTCPVFLYI DYGADIDAIR QQFISVVKDN KLWDNKTEPE IFVVEVTEKT
IQLRGAVSAV GPVEAWTLAC EIREQMLDYL YREQKHYLPA EHLVLRQK
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