| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0970 |
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| Symbol | |
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| ID | 3514377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1163157 |
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| End bp | 1165109 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637669659 |
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| Product | small-conductance mechanosensitive ion channel |
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| Protein accession | YP_264257 |
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| Protein GI | 71065530 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00371389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTTTG TTTTGTTTAT TAAGCGTCGT CTGAGTACTA CTGCCGTGCC ATCTTTATCG
ATGTCATTGA TGAAATTACC ATTAATCGTG ATGACTCTAC TTGTCGCTAT GGCACTCAGT
GTCATCTCGC AGCCTAGTGC GTTGGCAGCT GAGGCGAGCA TACTGGGTGT GGGTGGTACT
AAAACTGAGG AAGGGGATGG CACATCGATA CCTGATTCAT TCGGACGCGA TACGCCTCGA
CATACCGTTC AAGGATTTAT TGCAGCATTG GGTGAAAATG ATTATCTGCT CGCCAGTAAC
TATCTCAATC TATCTAAAGC TGATAATCCA ACCACTGTCG TCCGTCAGTT TAAGCAAGCA
CTCGATGCAG GTGGTCGTTT TCAGGCTGAT TTGCAGATTA ATAACACGCC TGAAGGCAAT
TTAACCGATC AACTACCGCC AAGCCAAGAA AATGTCGGTG TCATCAAAGT CAGTGATACA
AGCATTCCTT TGCTACTTGA AAGAGTGGTG TCGCAAGAAG GCGAGCAATA CTGGCAGTTT
TCTACTGATA CGCTCAGCTC AATACCAGAG GCAATAGAGA ACTATAAGCC GACTTTGGTT
TCTCGTTATA CCATTGATTC ACTAGAAGGT AAAAAGCTCT TTGGTTATCA GTTGGCTGAT
TTGGTTGCAG CTTTGGCGAT AACTGTCAGT AGTTTTTTAT TCACCTACAT CGTCGTATGG
CTACTGTATC ATTTATTGGA AATCACTTAC CCTCGTGTCC GTGATGTGCC GCTGCCATTG
CCAGATAAAG TTATATTGCC GCTAGCGGTG GTGATTATGG CGCTGATTTT GTCTGAGGTG
ATGGTTTATG CTGGGGTGTC AGTGACCCTG CGCGAGCCGG TCAACCGCTT CGCTGAGATT
GCTTCGTGGG TGGCAATAAC GTGGTTGTTA TTACGCATTA TCGATGCCTT ATTTACCCGT
GCAGTGAATT TAAGCTATAA GAAAAACTAT ACTGAACGGG TCTCGATTTT GGGACTATTA
CGCAAAGTCG TCAAAGCGCT ATTATTGATA TTTGCAGTCA TCGTCACTTT CGGTAACTTG
GGCTTTGACT TAACGACTGG TATTGCTGCA TTAGGGGTAG GGGGTTTAGC CTTAGCATTA
GGTGCGCAAA AGACCATCGA AAACTTAGTC GGCAGTGTGG TAGTGGTGGC AGATTCGCCT
GTGCGTATCG GTGACTATTG TAAATTTGGT ACGTATGAGG GCACCGTCAT CGATATTGGT
ATTCGCTCAT CGCGCGTGCG TACCTTGACC CGTACTATCG TCACGGTACC TAACGGTGAT
TTTTCATCAA TGCAAATTGA AAACTTTACC TCACGTGACA TGTTTCGCTT TTTACATCAA
CTATATATCA AGCGTACCGC TGATATTAAT GTTGTGTTTA AGATGGTAAA ACACTTGGAT
GAGTTTTTGG ATAAGCATGA ATTGACCAAT CAAGAATGGA ATCAAGTCAA TATCTTAGAG
TTGCGTCAAG ATAGTTATAT TATTCAGCTA CAAGCCTATA TCAATGCCAC TGGTATCATC
GAATTCTATG AAAAACAAGA CCGGTTATTC GTTGATTTGT TAATGCAAGT TAGGCAATAT
GATGTAGAGC ATGCTTTGCC AACACAGCAG CTGATTGTCA AGCAACCAGA GCTTCAGGCT
CAATTAGAAA ATGAAAATGA AGAAGGCGAG ACCGTTGATC ATAAAGATGA CAAAAAAATT
GCTACTGATA ACAAGTCAAA AGTCGTTCAT TTAAACAAAG ATAGTGATGC TGTTGATACG
GAAAATGAAA ATAAGCAGCC AGAGCCTGAA CCAAAAAGGG ATTTGTTAGA CAGTAGATAT
AAAGCTATTC ATAAAAGCAG CGGTCATACG TTAGCTCGAT TAAAATTCAA ACAGGTAAAA
AATAGCTTTA GATTCCCAAG AGCAAAAAAG TAA
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| Protein sequence | MRFVLFIKRR LSTTAVPSLS MSLMKLPLIV MTLLVAMALS VISQPSALAA EASILGVGGT
KTEEGDGTSI PDSFGRDTPR HTVQGFIAAL GENDYLLASN YLNLSKADNP TTVVRQFKQA
LDAGGRFQAD LQINNTPEGN LTDQLPPSQE NVGVIKVSDT SIPLLLERVV SQEGEQYWQF
STDTLSSIPE AIENYKPTLV SRYTIDSLEG KKLFGYQLAD LVAALAITVS SFLFTYIVVW
LLYHLLEITY PRVRDVPLPL PDKVILPLAV VIMALILSEV MVYAGVSVTL REPVNRFAEI
ASWVAITWLL LRIIDALFTR AVNLSYKKNY TERVSILGLL RKVVKALLLI FAVIVTFGNL
GFDLTTGIAA LGVGGLALAL GAQKTIENLV GSVVVVADSP VRIGDYCKFG TYEGTVIDIG
IRSSRVRTLT RTIVTVPNGD FSSMQIENFT SRDMFRFLHQ LYIKRTADIN VVFKMVKHLD
EFLDKHELTN QEWNQVNILE LRQDSYIIQL QAYINATGII EFYEKQDRLF VDLLMQVRQY
DVEHALPTQQ LIVKQPELQA QLENENEEGE TVDHKDDKKI ATDNKSKVVH LNKDSDAVDT
ENENKQPEPE PKRDLLDSRY KAIHKSSGHT LARLKFKQVK NSFRFPRAKK
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