More than 300 homologs were found in PanDaTox collection
for query gene Rcas_2545 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  100 
 
 
316 aa  625  1e-178  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  94.23 
 
 
315 aa  590  1e-167  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  66.13 
 
 
313 aa  419  1e-116  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  50.99 
 
 
305 aa  296  3e-79  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  48.45 
 
 
309 aa  293  3e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  47.8 
 
 
321 aa  288  9e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  47.4 
 
 
316 aa  287  1e-76  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  51.39 
 
 
306 aa  281  9e-75  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  49.47 
 
 
305 aa  280  2e-74  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  47.45 
 
 
317 aa  277  1e-73  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  48.33 
 
 
314 aa  275  8e-73  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  48.03 
 
 
316 aa  273  3e-72  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  49.28 
 
 
285 aa  270  2e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  43 
 
 
321 aa  259  3e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  41.69 
 
 
314 aa  257  2e-67  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  41.69 
 
 
314 aa  256  4e-67  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  49.16 
 
 
309 aa  255  5e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  43.32 
 
 
319 aa  253  3e-66  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  47.26 
 
 
307 aa  252  6e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
323 aa  251  1e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  42.14 
 
 
317 aa  249  3e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  42.67 
 
 
319 aa  250  3e-65  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
293 aa  249  3e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  44.41 
 
 
317 aa  249  5e-65  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  42.24 
 
 
318 aa  247  1e-64  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  40.78 
 
 
319 aa  247  2e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  43.92 
 
 
319 aa  245  6.999999999999999e-64  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  45.33 
 
 
307 aa  244  9.999999999999999e-64  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  42.61 
 
 
292 aa  243  1.9999999999999999e-63  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  45.61 
 
 
300 aa  243  3e-63  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  42.01 
 
 
318 aa  242  7e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  40.52 
 
 
324 aa  241  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  45.64 
 
 
331 aa  240  2e-62  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  44.25 
 
 
324 aa  239  5e-62  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  43.42 
 
 
296 aa  239  5.999999999999999e-62  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  41.97 
 
 
321 aa  238  1e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  43.06 
 
 
296 aa  238  1e-61  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  42.12 
 
 
305 aa  237  2e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  43.42 
 
 
296 aa  237  2e-61  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  39.87 
 
 
308 aa  236  3e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  43.06 
 
 
296 aa  236  3e-61  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  44.97 
 
 
302 aa  235  7e-61  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  43.11 
 
 
313 aa  231  9e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  42.59 
 
 
335 aa  230  3e-59  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  41.85 
 
 
317 aa  228  1e-58  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
314 aa  228  1e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  41.64 
 
 
296 aa  228  1e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  41.64 
 
 
296 aa  228  1e-58  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
298 aa  228  1e-58  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  42.28 
 
 
335 aa  228  2e-58  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  39.22 
 
 
314 aa  227  2e-58  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  42.57 
 
 
308 aa  226  3e-58  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  41.23 
 
 
315 aa  226  3e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  41.18 
 
 
309 aa  226  4e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  42.47 
 
 
317 aa  226  4e-58  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  41.39 
 
 
283 aa  226  5.0000000000000005e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  41.28 
 
 
296 aa  226  5.0000000000000005e-58  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  40.13 
 
 
302 aa  226  6e-58  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  41.28 
 
 
305 aa  226  6e-58  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  42.36 
 
 
320 aa  225  7e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  43 
 
 
321 aa  224  2e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  42.14 
 
 
296 aa  224  2e-57  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  40 
 
 
319 aa  223  2e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
316 aa  222  6e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
318 aa  222  6e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  42.36 
 
 
318 aa  221  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
293 aa  220  3e-56  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  41.35 
 
 
320 aa  219  3.9999999999999997e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
294 aa  217  2e-55  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
292 aa  216  4e-55  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  44.68 
 
 
318 aa  216  4e-55  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
322 aa  216  4e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  40.58 
 
 
319 aa  216  5e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  39.66 
 
 
308 aa  213  2.9999999999999995e-54  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  37.29 
 
 
312 aa  212  5.999999999999999e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  42.09 
 
 
313 aa  212  7.999999999999999e-54  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
317 aa  211  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  39.67 
 
 
309 aa  211  1e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
305 aa  211  1e-53  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  43.36 
 
 
300 aa  210  2e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  43.17 
 
 
334 aa  208  9e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  40.08 
 
 
299 aa  205  6e-52  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
295 aa  204  1e-51  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  38.39 
 
 
317 aa  203  4e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
308 aa  201  9.999999999999999e-51  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
306 aa  201  9.999999999999999e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
299 aa  201  1.9999999999999998e-50  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
320 aa  198  1.0000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
306 aa  197  2.0000000000000003e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  40.82 
 
 
296 aa  197  2.0000000000000003e-49  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
300 aa  196  6e-49  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
291 aa  195  7e-49  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
309 aa  195  8.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_1687  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
333 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  37.64 
 
 
300 aa  194  2e-48  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  38.94 
 
 
313 aa  194  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.72 
 
 
292 aa  192  7e-48  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
296 aa  192  9e-48  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
295 aa  191  2e-47  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  39.92 
 
 
275 aa  191  2e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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