More than 300 homologs were found in PanDaTox collection
for query gene Pcal_1356 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009073  Pcal_1356  binding-protein-dependent transport systems inner membrane component  100 
 
 
288 aa  555  1e-157  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.107464 
 
 
-
 
NC_008698  Tpen_1589  binding-protein-dependent transport systems inner membrane component  54.37 
 
 
297 aa  252  4.0000000000000004e-66  Thermofilum pendens Hrk 5  Archaea  normal  0.580051  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
299 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013922  Nmag_2237  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
319 aa  146  4.0000000000000006e-34  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
299 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
290 aa  142  6e-33  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_008786  Veis_1880  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
286 aa  132  9e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.262739  normal  0.333569 
 
 
-
 
NC_011899  Hore_13190  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
289 aa  128  1.0000000000000001e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_14540  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
289 aa  124  2e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000851926  n/a   
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  29.12 
 
 
334 aa  124  2e-27  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
312 aa  122  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2984  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
305 aa  122  5e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
294 aa  122  6e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
296 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
313 aa  117  3e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_013595  Sros_7165  ABC alpha-glucoside transporter inner membrane binding protein  32.41 
 
 
323 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0234886 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  31.14 
 
 
354 aa  116  3.9999999999999997e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
298 aa  116  5e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
307 aa  115  6e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  27.08 
 
 
307 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  31.29 
 
 
318 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  27.08 
 
 
307 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013947  Snas_4649  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
325 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  decreased coverage  0.000235602 
 
 
-
 
NC_009338  Mflv_3776  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
286 aa  114  2.0000000000000002e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.771132  normal  0.363599 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  30 
 
 
288 aa  114  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_007802  Jann_4089  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
293 aa  113  4.0000000000000004e-24  Jannaschia sp. CCS1  Bacteria  normal  normal  0.22308 
 
 
-
 
NC_009636  Smed_2698  binding-protein-dependent transport systems inner membrane component  29.76 
 
 
295 aa  112  9e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.0832027  normal 
 
 
-
 
NC_009953  Sare_3968  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
350 aa  111  1.0000000000000001e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.252536  normal  0.145093 
 
 
-
 
NC_008726  Mvan_2623  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
287 aa  111  1.0000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  29.95 
 
 
313 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
309 aa  112  1.0000000000000001e-23  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
309 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  32.64 
 
 
287 aa  110  2.0000000000000002e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
301 aa  110  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2279  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
286 aa  111  2.0000000000000002e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
300 aa  111  2.0000000000000002e-23  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3143  sugar ABC transporter  35.8 
 
 
290 aa  110  2.0000000000000002e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.382012  normal 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
300 aa  111  2.0000000000000002e-23  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0670  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
294 aa  110  2.0000000000000002e-23  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2171  carbohydrate ABC transporter permease  31.39 
 
 
280 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0580768  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  27.63 
 
 
299 aa  110  3e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2083  carbohydrate ABC transporter permease  31.39 
 
 
286 aa  110  3e-23  Yersinia pestis Angola  Bacteria  normal  normal  0.0183943 
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
311 aa  110  4.0000000000000004e-23  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
310 aa  109  6e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  32.13 
 
 
308 aa  108  8.000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_011989  Avi_0786  ABC transporter membrane spanning protein  30.24 
 
 
343 aa  108  8.000000000000001e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
308 aa  108  8.000000000000001e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
314 aa  108  9.000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  27.08 
 
 
318 aa  108  9.000000000000001e-23  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  26.43 
 
 
311 aa  108  9.000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
330 aa  108  9.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  29.17 
 
 
305 aa  108  1e-22  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_2153  Fructose-bisphosphate aldolase  27.27 
 
 
451 aa  108  1e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.216937  n/a   
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  26.39 
 
 
291 aa  108  1e-22  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
316 aa  107  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
319 aa  107  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  26.09 
 
 
298 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
313 aa  107  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1095  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
281 aa  106  3e-22  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  26.79 
 
 
315 aa  107  3e-22  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
299 aa  107  3e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_09500  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
296 aa  106  3e-22  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.00000000000000144721  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
328 aa  106  4e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
306 aa  106  4e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_008699  Noca_3682  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
283 aa  106  4e-22  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  26.52 
 
 
307 aa  106  5e-22  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  28.23 
 
 
293 aa  106  5e-22  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_013171  Apre_0239  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
288 aa  105  7e-22  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2856  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
346 aa  105  7e-22  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  26.84 
 
 
435 aa  105  7e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  30.83 
 
 
313 aa  105  7e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
317 aa  105  9e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_012850  Rleg_0388  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
337 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.684401  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  30 
 
 
314 aa  104  1e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  28 
 
 
320 aa  105  1e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_008043  TM1040_3215  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
291 aa  104  1e-21  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  26.78 
 
 
427 aa  104  1e-21  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_009380  Strop_3588  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
358 aa  105  1e-21  Salinispora tropica CNB-440  Bacteria  normal  0.463035  normal 
 
 
-
 
NC_010003  Pmob_0474  binding-protein-dependent transport systems inner membrane component  26.51 
 
 
291 aa  105  1e-21  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  25.79 
 
 
314 aa  104  2e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  25.79 
 
 
314 aa  104  2e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0356  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
337 aa  103  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.36183 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
297 aa  104  2e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_3349  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
291 aa  104  2e-21  Variovorax paradoxus S110  Bacteria  normal  0.230089  n/a   
 
 
-
 
NC_009952  Dshi_1651  inner membrane ABC transporter permease protein  31.25 
 
 
334 aa  104  2e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0167176  hitchhiker  0.00000136024 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  27.9 
 
 
324 aa  104  2e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
305 aa  104  2e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
316 aa  103  2e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  30.93 
 
 
306 aa  104  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1179  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
367 aa  103  2e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
315 aa  103  2e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3816  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
293 aa  104  2e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0253995  n/a   
 
 
-
 
NC_013923  Nmag_3872  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
315 aa  104  2e-21  Natrialba magadii ATCC 43099  Archaea  normal  0.0566045  n/a   
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
292 aa  103  3e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  29.66 
 
 
306 aa  103  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1742  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
292 aa  103  3e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
310 aa  103  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
294 aa  103  4e-21  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3956  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
309 aa  103  4e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  27.57 
 
 
293 aa  103  4e-21  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
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