| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1356 |
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| Symbol | |
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| ID | 4910303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1271471 |
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| End bp | 1272337 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125108 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001056244 |
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| Protein GI | 126459966 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.107464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAGT ACCTAGTTTT TTTGGTTGCC CCGCTTGTTT TTCTTGCCGT TTTTACCTTC
TACCCCGCCG TGGCTACCTT TGTCTATAGC TTCTACACCG GCGGGGGGTT TGGCTTTGAC
AATTATGCGA AAGTTTTAAC TGACACAAAT CCGCTGAGGG CGTTGGTGTT GCCGACTCTC
TCGGGCACGC CTCCTTGGGG GGCGCTGGTG CACAATGTGG TGTGGATCGC CATACACGTC
CCCGTGGTCA CTGTGCTGGG CCTCTTGTTG GCCTTTGTTC TTAAGTACTA CGTGGTGGGT
AGCAACGTGG TGAAGGGGGT GGTGTTTTTG GGTATGGTGG TGCCTCCGGC CGTCAGTGGG
CTGATTATCA GATTTATGTT TGACAGGGAT ATCGGCCTAG TCCCAATGTT TTTCTCCGCG
CTTGGGGTGA AAGAGCTGGC GGTGACGTGG ATCGCCTATC CTGGCCTGGC CCTCTACGCG
TTGATTCTGG GCTCGGTGTG GGTTTGGCTT GGGTTTTCTG TGACTATCTT CGCCGCGGCT
CTCGAGGCTG TGCCTAAGAG CCACATAGAG GCGGCGAGGG TATTCGGCGC ATCTAGTTGG
CAGATCTTCC GCAGAGTTGT TGTGCCCGAG GTGCGGCCGG CGATTATCAT TGTGGTGGTG
ATGACCGTGT TGTGGGACAT GAAGATTTTC GACGTGGTTT TTGCCTCCAC TGGCGGGGGG
CCCGGCGGGG CCACCAACGT CTTGGCCCTG GTCATGTACA ACTACTTTGC CAGACTTTTG
GACTACTACC GGTCGGCGGC TGTGGCAGTA ATATTGACTT TGCTCGTGGT CCCCGCCATT
GTCGTGGCCA TTAAGAGGTG GCTATGA
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| Protein sequence | MRQYLVFLVA PLVFLAVFTF YPAVATFVYS FYTGGGFGFD NYAKVLTDTN PLRALVLPTL
SGTPPWGALV HNVVWIAIHV PVVTVLGLLL AFVLKYYVVG SNVVKGVVFL GMVVPPAVSG
LIIRFMFDRD IGLVPMFFSA LGVKELAVTW IAYPGLALYA LILGSVWVWL GFSVTIFAAA
LEAVPKSHIE AARVFGASSW QIFRRVVVPE VRPAIIIVVV MTVLWDMKIF DVVFASTGGG
PGGATNVLAL VMYNYFARLL DYYRSAAVAV ILTLLVVPAI VVAIKRWL
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