| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3588 |
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| Symbol | |
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| ID | 5060063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4102540 |
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| End bp | 4103616 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640475843 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001160397 |
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| Protein GI | 145596100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.463035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCG ACTTCGCCGA TGAGGCACCA AAACTCGCGA TGTTGCTGTA CGGGGTGGTC
GCCTTCGTGG CGGTGGTCGG TGGCCTCCTA CTGCTACTCG ACGTTGTCCC CGCCCGGCTC
GCCCGCCGCC GGCAGGCCCG GCTCGCCCGC CGCCGGCAGG CCCGGCTCGC CGCGGCCGCC
GCCGCGGGAA CGCCGCTCGA GCCGGGCCGG CGCCGCTCCC GCGAGGGCCT GTTCGCCCTC
TTCTTTCTGC TACCCACGGT CCTGATGCTC GGCATCGGGC TGATCATCCC CGCGATCCGT
ACCCTCGTGC TGTCGCTCAA GAACGGCGAC AGCACGCAAT GGGTCGGGCT GCGCAACTAC
GGCTGGATGG TCGACCGGCC CGAGATCGTC GACATCCTGT GGAACACCGC CCTCTGGGTG
CTGCTGGTGC CGCTGCTGGC CACCTCGGTC GGCCTGATCT ACGCGGTGCT CGTCGACCGC
GCCCGCCTGG AGGCCCTGGC CAAGTCCCTG ATCTTCCTGC CGATGGCGAT CTCGTTCGTC
GGCGCCGGCA TCATCTGGAA GTTCGTCTAC GCGTTCCGGC CCGCGGAGGC AGACCAGATC
GGCCTGCTGA ACCAAATCTG GGTGTGGGTC GGCGGCGAGC CCCAGCAGTG GCTGTCGAAC
CCGCCGCTGA ACACCCTGCT GCTGATCGTG GTGATGATCT GGATCCAGGC CGGTTTCGCC
ATGGTGGTGC TCTCGGCCGC CATCAAGGCC ATTCCCACCG ACATGATCGA AGCTGCTCGT
ATCGACGGCG TGAACGCCTG GCAGCAGTTC TGGCGGATCA CCCTGCCAGG TATCCGGCCC
GCCCTGATCG TGGTGGTGGT GACCATCTCG ATCGCCACGC TGAAGCTCTT CGACGTCGTC
CGCACGATGA CGAACGGCAA CTTCAACACC AATGTGATCG CGACCGAGAT GTACAACCAG
GCGTTCCGGT ACGGGCAGAC CGGCCAGGGC TCTGCCCTCG CCGTCGTCCT GTTCATCCTG
GTCATTCCCA TCGTCATCTA CCAGGTACGC AATCTGCGCC GGCAGCGGGA GGTATGA
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| Protein sequence | MNFDFADEAP KLAMLLYGVV AFVAVVGGLL LLLDVVPARL ARRRQARLAR RRQARLAAAA
AAGTPLEPGR RRSREGLFAL FFLLPTVLML GIGLIIPAIR TLVLSLKNGD STQWVGLRNY
GWMVDRPEIV DILWNTALWV LLVPLLATSV GLIYAVLVDR ARLEALAKSL IFLPMAISFV
GAGIIWKFVY AFRPAEADQI GLLNQIWVWV GGEPQQWLSN PPLNTLLLIV VMIWIQAGFA
MVVLSAAIKA IPTDMIEAAR IDGVNAWQQF WRITLPGIRP ALIVVVVTIS IATLKLFDVV
RTMTNGNFNT NVIATEMYNQ AFRYGQTGQG SALAVVLFIL VIPIVIYQVR NLRRQREV
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