52 homologs were found in PanDaTox collection
for query gene Msil_2400 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_2400  tungsten-containing formylmethanofuran dehydrogenase, subunit B  100 
 
 
369 aa  722    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007484  Noc_0025  formylmethanofuran dehydrogenase  31.78 
 
 
425 aa  197  2.0000000000000003e-49  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1662  formylmethanofuran dehydrogenase, subunit B  31.78 
 
 
434 aa  180  4e-44  Methylobacillus flagellatus KT  Bacteria  normal  0.0130611  normal  0.319857 
 
 
-
 
NC_002977  MCA2860  formylmethanofuran dehydrogenase  36.25 
 
 
423 aa  177  4e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  0.807809  n/a   
 
 
-
 
NC_010505  Mrad2831_0526  tungsten-containing formylmethanofuran dehydrogenase, subunit B  34.75 
 
 
356 aa  164  3e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.675235 
 
 
-
 
NC_010725  Mpop_1778  tungsten-containing formylmethanofuran dehydrogenase, subunit B  35.22 
 
 
358 aa  158  1e-37  Methylobacterium populi BJ001  Bacteria  normal  0.074485  normal 
 
 
-
 
NC_011757  Mchl_2162  tungsten-containing formylmethanofuran dehydrogenase, subunit B  33.92 
 
 
362 aa  154  2.9999999999999998e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.175544  normal  0.0910953 
 
 
-
 
NC_010172  Mext_1827  tungsten-containing formylmethanofuran dehydrogenase, subunit B  33.92 
 
 
362 aa  153  5.9999999999999996e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6000  tungsten-containing formylmethanofuran dehydrogenase, subunit B  37.68 
 
 
356 aa  145  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.164636  n/a   
 
 
-
 
NC_012791  Vapar_3067  formylmethanofuran dehydrogenase, subunit B  30.9 
 
 
410 aa  128  1.0000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2623  formylmethanofuran dehydrogenase, subunit B  31.4 
 
 
423 aa  124  3e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2461  formylmethanofuran dehydrogenase, subunit B  29.74 
 
 
466 aa  123  5e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.174892 
 
 
-
 
NC_010625  Bphy_5935  formylmethanofuran dehydrogenase  28.68 
 
 
446 aa  122  9e-27  Burkholderia phymatum STM815  Bacteria  normal  0.911434  normal  0.0527378 
 
 
-
 
NC_010625  Bphy_6504  formyltransferase/hydrolase complex subunit B(FhcB)  30.37 
 
 
469 aa  122  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0374331 
 
 
-
 
NC_010511  M446_5776  tungsten-containing formylmethanofuran dehydrogenase, subunit B  38.93 
 
 
357 aa  119  7.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1796  formylmethanofuran dehydrogenase  33.05 
 
 
440 aa  118  1.9999999999999998e-25  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00519016  normal  0.685943 
 
 
-
 
NC_010524  Lcho_3136  formylmethanofuran dehydrogenase  30.66 
 
 
433 aa  95.9  1e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009634  Mevan_0993  molybdopterin oxidoreductase  27.33 
 
 
434 aa  94.4  3e-18  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1715  formylmethanofuran dehydrogenase, subunit B  26.67 
 
 
437 aa  92  2e-17  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0980  molybdopterin oxidoreductase  26.35 
 
 
434 aa  91.7  2e-17  Methanococcus maripaludis C6  Archaea  normal  0.0412104  n/a   
 
 
-
 
NC_008553  Mthe_1096  molybdopterin oxidoreductase  27.45 
 
 
430 aa  91.7  2e-17  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0966  tungsten containing formylmethanofuran dehydrogenase subunit B  26.03 
 
 
434 aa  90.1  5e-17  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_1187  formylmethanofuran dehydrogenase, subunit B  24.8 
 
 
429 aa  84.7  0.000000000000002  Methanoculleus marisnigri JR1  Archaea  normal  0.639664  n/a   
 
 
-
 
NC_009634  Mevan_0067  molybdopterin oxidoreductase  26.06 
 
 
434 aa  82.8  0.000000000000009  Methanococcus vannielii SB  Archaea  normal  0.589018  n/a   
 
 
-
 
NC_009051  Memar_1829  molydopterin dinucleotide-binding region  25.71 
 
 
587 aa  80.9  0.00000000000004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2922  formylmethanofuran dehydrogenase, subunit B  25.39 
 
 
415 aa  73.6  0.000000000005  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.113805  hitchhiker  0.00114048 
 
 
-
 
NC_007796  Mhun_2108  formylmethanofuran dehydrogenase, subunit B  26.44 
 
 
434 aa  71.2  0.00000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_0100  molybdopterin oxidoreductase  22.55 
 
 
434 aa  71.6  0.00000000002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.193455  n/a   
 
 
-
 
NC_007355  Mbar_A1560  formylmethanofuran dehydrogenase, subunit B  25.31 
 
 
454 aa  70.9  0.00000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0264444  normal 
 
 
-
 
NC_009635  Maeo_1462  molybdopterin oxidoreductase  23.57 
 
 
434 aa  67  0.0000000005  Methanococcus aeolicus Nankai-3  Archaea  normal  0.701357  n/a   
 
 
-
 
NC_011832  Mpal_2235  formylmethanofuran dehydrogenase subunit B  22.97 
 
 
437 aa  66.2  0.0000000009  Methanosphaerula palustris E1-9c  Archaea  normal  0.291466  normal  0.0456097 
 
 
-
 
NC_007796  Mhun_1983  molybdopterin oxidoreductase  22.97 
 
 
439 aa  64.3  0.000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.225024 
 
 
-
 
NC_009975  MmarC6_0380  molybdenum containing formylmethanofuran dehydrogenase, subunit B  24.6 
 
 
443 aa  63.9  0.000000004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0085  molybdopterin oxidoreductase  23.13 
 
 
447 aa  63.5  0.000000006  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1292  formylmethanofuran dehydrogenase, subunit B  23.9 
 
 
433 aa  62.4  0.00000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.646537 
 
 
-
 
NC_009637  MmarC7_1532  molybdenum containing formylmethanofuran dehydrogenase, subunit B  23.62 
 
 
443 aa  61.2  0.00000003  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.00478576 
 
 
-
 
NC_009135  MmarC5_1449  formylmethanofuran dehydrogenase, subunit B  23.4 
 
 
442 aa  60.8  0.00000003  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_0244  formylmethanofuran dehydrogenase, subunit B  23.38 
 
 
438 aa  60.8  0.00000004  Methanocorpusculum labreanum Z  Archaea  normal  0.833805  normal  0.256127 
 
 
-
 
NC_007355  Mbar_A1763  formylmethanofuran dehydrogenase, subunit B  23.2 
 
 
470 aa  60.5  0.00000005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_1664  molybdenum containing formylmethanofuran dehydrogenase, subunit B  23.36 
 
 
442 aa  58.9  0.0000001  Methanococcus vannielii SB  Archaea  normal  0.827559  n/a   
 
 
-
 
NC_008942  Mlab_1389  formylmethanofuran dehydrogenase, subunit B  22.19 
 
 
574 aa  57  0.0000005  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_0281  formylmethanofuran dehydrogenase, subunit B  24.18 
 
 
435 aa  56.6  0.0000006  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0336  formylmethanofuran dehydrogenase, subunit B  25.42 
 
 
414 aa  56.2  0.0000009  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_1994  molybdopterin oxidoreductase  24.61 
 
 
467 aa  55.8  0.000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0821862  normal  0.218905 
 
 
-
 
NC_007796  Mhun_1988  formylmethanofuran dehydrogenase subunit B  23.89 
 
 
443 aa  55.8  0.000001  Methanospirillum hungatei JF-1  Archaea  normal  0.209103  normal  0.117203 
 
 
-
 
NC_009051  Memar_0620  molybdopterin oxidoreductase  21.86 
 
 
437 aa  55.5  0.000002  Methanoculleus marisnigri JR1  Archaea  normal  0.475538  n/a   
 
 
-
 
NC_009051  Memar_0372  formylmethanofuran dehydrogenase subunit B  25.2 
 
 
456 aa  55.5  0.000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_0203  formylmethanofuran dehydrogenase subunit B  24.08 
 
 
454 aa  53.5  0.000005  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0806665 
 
 
-
 
NC_008553  Mthe_0977  tungsten formylmethanofuran dehydrogenase subunit B  24.8 
 
 
406 aa  53.1  0.000007  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_014148  Plim_2299  Formylmethanofuran dehydrogenase subunit B-like protein  23.03 
 
 
427 aa  52.8  0.000009  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.122072  n/a   
 
 
-
 
NC_009712  Mboo_0877  molybdopterin oxidoreductase  21.85 
 
 
461 aa  50.1  0.00005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.138974  normal 
 
 
-
 
NC_009712  Mboo_1471  formylmethanofuran dehydrogenase subunit B  22.36 
 
 
461 aa  45.4  0.002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
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