Gene Mboo_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0877 
Symbol 
ID5410758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp854645 
End bp856030 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content56% 
IMG OID640868103 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001404038 
Protein GI154150420 
COG category[C] Energy production and conversion 
COG ID[COG1029] Formylmethanofuran dehydrogenase subunit B 
TIGRFAM ID[TIGR03129] formylmethanofuran dehydrogenase subunit B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.138974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG AAGTTACTGA TGTTATCTGT CCGTTCTGCG GAACCCTGTG TGATGATATC 
GTCATCACGG TATCCGATGA CAACAAGACA ATCCTTGGTG TCAAGAATGC ATGCGCTATC
GGCGCTGAAA AGTTCAACCA CCAGCGCCTC CCGGGCCGGG TCAAGCGCCC GCGGATGCGA
CAGGCCGACG GGACCTTTAA GGAGGTTTCG TACGATGAAG CTATCGACTG GACTGCAAAG
ATGCTCGTGA AGTCCCGAAA GACCCTGATG TACGGCTGGG CATCCACCAG CTGCCAGGCC
ATGAGCGTTG GTCATGAGAT CGCAGAAAAA ACCGGAGCGA TTGTCGACAA CTGTGCAACG
GTCTGCCACG GATCGTCCCT TATCGCCATC GAAGATGTAG GTGTCCCAAG CTGTACCCTC
GGTGAGGTCA AGAACCGTGC GGACCGCGTT ATTTTCTGGG GCTGCAACCC GGCACACGCC
CACCCCCGGC ATATGTCCAG GTACTCAATC TTCCCCCGCG GGTTTTTCAC CGTCAAGGGC
CACAAGGGCC GGAAGATCTA CTGCGTTGAC TGCCGGTATA CCGACACGGC AAAATGTGCA
GATGAGTTCA TCCAGGTTGC GCAGGGATTC GATTACGAGC TCTTGAACGC ATTCAGGGCT
GCGGCCCGCG GCGAAACGAT ACCGGATACG GTAGGCGGGG TCCCAAAAGA GAAGATCCAG
GAAATAATCG GGGACTTAAA GCAGGGCAGG TTCATTATCA TCTTCTTTGG CATGGGACTC
ACCCACTCCA TGGGAAGGAA CCACAACATC GATATCGCCA TCAACCTGAC CCGTGACTTA
AACGACTTCA CGAAAGCCGC GATCATGGCA ATGCGGGGCC ACTGGAACGT TACCGGCTCC
GGGCAGGTTC TCGGCTGGCA GTACGGGTTC CCGTATGCAG TTGATCTCTC ACGCAGGGAC
CAGGCACGCC ACCAGACCGG CGAGACGACA TCAGTCGATC TTCTCAACCG GAACGAGGTA
GAGGCCTGTT TCTATATCGC AACCGATCCG GGCGCTCACT TCCCGGTGGA TGCAATGATC
AGCAGTTCCA AGAAACCCAC CGTCACCGTG GATCCGCACA TTAACTGTAC GACTGAGATC
TCCGATCTCC ACATCCCGGT CGCCATGGTC GGCGTCGAAG TAGAGGGTTG TGCCTATCGT
ATGGACAATG TCCCGATCGA AACCCGTAAA GTGGTTGATC CGCCAGAGGG TATGCTGACA
GACGTTGAGC TCCTGACCAG GATCAACCAG CGCGTCGATG AGCTCATTGC CGCCGAAAGT
GCGGCGAGCA AAGGAGCCAA GATCGAGCAG CATGCGGACA AAGCCATGGC CAAGGGAGGG
GCGTAA
 
Protein sequence
MPKEVTDVIC PFCGTLCDDI VITVSDDNKT ILGVKNACAI GAEKFNHQRL PGRVKRPRMR 
QADGTFKEVS YDEAIDWTAK MLVKSRKTLM YGWASTSCQA MSVGHEIAEK TGAIVDNCAT
VCHGSSLIAI EDVGVPSCTL GEVKNRADRV IFWGCNPAHA HPRHMSRYSI FPRGFFTVKG
HKGRKIYCVD CRYTDTAKCA DEFIQVAQGF DYELLNAFRA AARGETIPDT VGGVPKEKIQ
EIIGDLKQGR FIIIFFGMGL THSMGRNHNI DIAINLTRDL NDFTKAAIMA MRGHWNVTGS
GQVLGWQYGF PYAVDLSRRD QARHQTGETT SVDLLNRNEV EACFYIATDP GAHFPVDAMI
SSSKKPTVTV DPHINCTTEI SDLHIPVAMV GVEVEGCAYR MDNVPIETRK VVDPPEGMLT
DVELLTRINQ RVDELIAAES AASKGAKIEQ HADKAMAKGG A