45 homologs were found in PanDaTox collection
for query gene Vapar_3067 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_3067  formylmethanofuran dehydrogenase, subunit B  100 
 
 		 410 aa  809    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2623  formylmethanofuran dehydrogenase, subunit B  56.71 
 
 		 423 aa  425  1e-118  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5935  formylmethanofuran dehydrogenase  48.59 
 
 		 446 aa  374  1e-102  Burkholderia phymatum STM815  Bacteria  normal  0.911434  normal  0.0527378 
 
 
-
 
NC_007952  Bxe_B2461  formylmethanofuran dehydrogenase, subunit B  45.23 
 
 		 466 aa  301  1e-80  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.174892 
 
 
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NC_010524  Lcho_3136  formylmethanofuran dehydrogenase  47.96 
 
 		 433 aa  291  1e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010625  Bphy_6504  formyltransferase/hydrolase complex subunit B(FhcB)  41.33 
 
 		 469 aa  274  2.0000000000000002e-72  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0374331 
 
 
-
 
NC_007947  Mfla_1662  formylmethanofuran dehydrogenase, subunit B  34.06 
 
 		 434 aa  228  2e-58  Methylobacillus flagellatus KT  Bacteria  normal  0.0130611  normal  0.319857 
 
 
-
 
NC_007484  Noc_0025  formylmethanofuran dehydrogenase  32.93 
 
 		 425 aa  214  2.9999999999999995e-54  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA2860  formylmethanofuran dehydrogenase  34.45 
 
 		 423 aa  172  6.999999999999999e-42  Methylococcus capsulatus str. Bath  Bacteria  normal  0.807809  n/a   
 
 
-
 
NC_009720  Xaut_1796  formylmethanofuran dehydrogenase  34.59 
 
 		 440 aa  154  2e-36  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00519016  normal  0.685943 
 
 
-
 
NC_011666  Msil_2400  tungsten-containing formylmethanofuran dehydrogenase, subunit B  30.92 
 
 		 369 aa  118  1.9999999999999998e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010505  Mrad2831_0526  tungsten-containing formylmethanofuran dehydrogenase, subunit B  35.79 
 
 		 356 aa  107  3e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.675235 
 
 
-
 
NC_009975  MmarC6_0980  molybdopterin oxidoreductase  27.09 
 
 		 434 aa  95.1  2e-18  Methanococcus maripaludis C6  Archaea  normal  0.0412104  n/a   
 
 
-
 
NC_009634  Mevan_0993  molybdopterin oxidoreductase  27.48 
 
 		 434 aa  94.7  2e-18  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_6000  tungsten-containing formylmethanofuran dehydrogenase, subunit B  36.24 
 
 		 356 aa  94.7  3e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.164636  n/a   
 
 
-
 
NC_009637  MmarC7_0966  tungsten containing formylmethanofuran dehydrogenase subunit B  27.09 
 
 		 434 aa  94.4  4e-18  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_1778  tungsten-containing formylmethanofuran dehydrogenase, subunit B  32.05 
 
 		 358 aa  93.2  7e-18  Methylobacterium populi BJ001  Bacteria  normal  0.074485  normal  1 
 
 
-
 
NC_009135  MmarC5_1715  formylmethanofuran dehydrogenase, subunit B  26.64 
 
 		 437 aa  92.4  1e-17  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_2162  tungsten-containing formylmethanofuran dehydrogenase, subunit B  32.38 
 
 		 362 aa  90.1  6e-17  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.175544  normal  0.0910953 
 
 
-
 
NC_010172  Mext_1827  tungsten-containing formylmethanofuran dehydrogenase, subunit B  32.38 
 
 		 362 aa  90.1  7e-17  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_0067  molybdopterin oxidoreductase  25.56 
 
 		 434 aa  85.5  0.000000000000002  Methanococcus vannielii SB  Archaea  normal  0.589018  n/a   
 
 
-
 
NC_009051  Memar_0620  molybdopterin oxidoreductase  25.81 
 
 		 437 aa  82.8  0.00000000000001  Methanoculleus marisnigri JR1  Archaea  normal  0.475538  n/a   
 
 
-
 
NC_007796  Mhun_2108  formylmethanofuran dehydrogenase, subunit B  24.66 
 
 		 434 aa  77.4  0.0000000000004  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2235  formylmethanofuran dehydrogenase subunit B  23.31 
 
 		 437 aa  74.7  0.000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.291466  normal  0.0456097 
 
 
-
 
NC_008553  Mthe_1096  molybdopterin oxidoreductase  22.94 
 
 		 430 aa  72.4  0.00000000001  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_014148  Plim_2299  Formylmethanofuran dehydrogenase subunit B-like protein  24.28 
 
 		 427 aa  70.9  0.00000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.122072  n/a   
 
 
-
 
NC_009635  Maeo_1462  molybdopterin oxidoreductase  24.14 
 
 		 434 aa  70.9  0.00000000004  Methanococcus aeolicus Nankai-3  Archaea  normal  0.701357  n/a   
 
 
-
 
NC_010511  M446_5776  tungsten-containing formylmethanofuran dehydrogenase, subunit B  36.73 
 
 		 357 aa  70.1  0.00000000006  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009051  Memar_1829  molydopterin dinucleotide-binding region  25.06 
 
 		 587 aa  70.1  0.00000000007  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_008942  Mlab_1389  formylmethanofuran dehydrogenase, subunit B  23.47 
 
 		 574 aa  68.9  0.0000000001  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_0977  tungsten formylmethanofuran dehydrogenase subunit B  23.88 
 
 		 406 aa  66.6  0.0000000007  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_009712  Mboo_0877  molybdopterin oxidoreductase  22.97 
 
 		 461 aa  65.5  0.000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.138974  normal  1 
 
 
-
 
NC_007355  Mbar_A2922  formylmethanofuran dehydrogenase, subunit B  22.12 
 
 		 415 aa  65.5  0.000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.113805  hitchhiker  0.00114048 
 
 
-
 
NC_009051  Memar_1187  formylmethanofuran dehydrogenase, subunit B  25.56 
 
 		 429 aa  65.1  0.000000002  Methanoculleus marisnigri JR1  Archaea  normal  0.639664  n/a   
 
 
-
 
NC_008942  Mlab_0244  formylmethanofuran dehydrogenase, subunit B  25.4 
 
 		 438 aa  64.3  0.000000003  Methanocorpusculum labreanum Z  Archaea  normal  0.833805  normal  0.256127 
 
 
-
 
NC_009635  Maeo_0100  molybdopterin oxidoreductase  23.34 
 
 		 434 aa  64.7  0.000000003  Methanococcus aeolicus Nankai-3  Archaea  normal  0.193455  n/a   
 
 
-
 
NC_007796  Mhun_1983  molybdopterin oxidoreductase  23.57 
 
 		 439 aa  63.2  0.000000009  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.225024 
 
 
-
 
NC_009051  Memar_0372  formylmethanofuran dehydrogenase subunit B  23.87 
 
 		 456 aa  62.8  0.00000001  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_009712  Mboo_1471  formylmethanofuran dehydrogenase subunit B  23.28 
 
 		 461 aa  59.7  0.00000009  Candidatus Methanoregula boonei 6A8  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_0203  formylmethanofuran dehydrogenase subunit B  23.38 
 
 		 454 aa  57.8  0.0000003  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.0806665 
 
 
-
 
NC_007955  Mbur_0336  formylmethanofuran dehydrogenase, subunit B  22.84 
 
 		 414 aa  57.4  0.0000004  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_1994  molybdopterin oxidoreductase  21.87 
 
 		 467 aa  52.8  0.00001  Methanospirillum hungatei JF-1  Archaea  normal  0.0821862  normal  0.218905 
 
 
-
 
NC_009635  Maeo_0085  molybdopterin oxidoreductase  21.1 
 
 		 447 aa  52  0.00002  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_1988  formylmethanofuran dehydrogenase subunit B  20.91 
 
 		 443 aa  49.7  0.00009  Methanospirillum hungatei JF-1  Archaea  normal  0.209103  normal  0.117203 
 
 
-
 
NC_007355  Mbar_A1763  formylmethanofuran dehydrogenase, subunit B  22.04 
 
 		 470 aa  46.2  0.001  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
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