Gene Mlab_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1389 
Symbol 
ID4795705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1417512 
End bp1419236 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content52% 
IMG OID640100073 
Productformylmethanofuran dehydrogenase, subunit B 
Protein accessionYP_001030822 
Protein GI124486206 
COG category[C] Energy production and conversion 
COG ID[COG1029] Formylmethanofuran dehydrogenase subunit B
[COG1153] Formylmethanofuran dehydrogenase subunit D 
TIGRFAM ID[TIGR03129] formylmethanofuran dehydrogenase subunit B 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGC TGATGAGCAG CGGCCGAACG ATCGATCAGG GAAAAGCCCT CTATCACAAA 
GAGGGAGAGA GTTACTCCAG GAGTACATCG CTCTGCTATC TGCATCCAAT GGACATGATG
GACCTCGATA TTGAAGACGG AGAGCAGATC CTCGTTTCCT CACCAGTGAC TTCCATCGTT
TTTACTGCTA TCCAGTCTTC AGACACCCCC AGAGGCATCA TTTACATGCC GCTTGGTCCA
TACTGCAATG CTCTGCTGAC GGGAAACACT CACTCCACCG GAGCTCCTGA CTTTAAAGGT
ATAATCGTGG AAGTCTCGGC CACGAAGGAA AAATCGGTTT CGGCAACGGA TCTTATGATT
GACCTTGGCG GAGTTCCTTT CGACCTTCCA ACTGCCGACA GAGTTCCCGG CTGTCCAGAT
GGGGAGATAG TAGCACAGCA TGCCGTCTGC CCGATGTGCG GGTGCGTCTG TGATGATCTG
GAGATTCATT TCTCAAACGG GAAAGTCACA TCAGTCGTAA ACGGCTGTAC GCTCTGTGCC
GAAAAATTCA AAGCATCCGG CAGGCTCCTC TCCCCCGCGG TTCGTGAAGG AAATGAATGG
AGATATACCG ATTACGATGA AGCGATAACC AAGACCGCGA TGTGTCTCGC CCACGCAAAA
CGGCCGCTCT TGTACGGATG GAGCAGTACA TCGGCCGAGG CAATGCAGGT TGGAATCGAA
CTCGCCGAAG AGGTCGGGGG CGTGATAGAC AACTGTTCTT CGGAATGTCA CGGACCAACG
GTTCTCGCCA TCCAGGAGGT TGGCCATCCG GGATGTACAC TTGGTCAGGT CAAGAACAGG
GCCGACGTCG TGGTCTACTG GGCATGTAAT CCGCAGGTAG CCCATCCGCG GCATATGTCC
CGCTATACGA CCTATACATC AGGTTATTTC CGAAAAGAGG GAAGAGAGGA TCGAACAATT
GTCGTGGTTG ACATTCGTGA ATCCGAGACG GCAAAATTGG CAGATGTCTT CCTGAAAATA
AAACCGGGAG CGGATTTTGC CGTATTCAAT GCTCTGCGGG CGATCGTCTC CGGGAAAGGA
GATATCCTCC CCGATGAGAT CGGCGGGGTC GAGAAGGGTC AGCTCTTAAA ACTCGGGGAC
ATCCTGCTTG GCGCAAAGTT CGGGATCTTT TTTACCGGGG TTGGGCTCAC CCACTCAAGA
GGAAAGTACA AAAACGTCCG GGCAGGAATC GAACTTATCG ATGAACTGAA CCGTCATACC
AAATATGCCC TTTCCCCTCT CAAAGGTCAC TGGAACGTGG ACGGTACATG CCATATCTTC
TCTCTGACAA CAGGCTATCC GTTTGCCATC GACTATTCGC GCGGGATCGC CTACTACAAT
CCCGGCGAAA CGAGCGGGAT CGATCTGCTG GAACGAAACG AGGTCGACTG CTGTGTTGTC
GTATCGACAG ATATCGGCGC ACATTTCCCG AGAACAAGCA TCGAAAGACT GGCGAAAATA
AACACGATCG TCCTTGACCC CTACGTGTCG CTGACAACTC CGTTTGCCAA GATCCAGCTG
CCGGGATCCA TCGTCGGGAT CGATACGCAA GGTACAGCAT ACCGGATGGA CGGGATCCCA
ATTCATGTCA AAAAGATCCT CGACTCCTCT GTTCCTTCGG ATACGGAGAT ACTCCAGCGC
ATTCTCTCAG AAGTCAGACG GATCAAAAAA GAGCAGACAG TGTAA
 
Protein sequence
MKMLMSSGRT IDQGKALYHK EGESYSRSTS LCYLHPMDMM DLDIEDGEQI LVSSPVTSIV 
FTAIQSSDTP RGIIYMPLGP YCNALLTGNT HSTGAPDFKG IIVEVSATKE KSVSATDLMI
DLGGVPFDLP TADRVPGCPD GEIVAQHAVC PMCGCVCDDL EIHFSNGKVT SVVNGCTLCA
EKFKASGRLL SPAVREGNEW RYTDYDEAIT KTAMCLAHAK RPLLYGWSST SAEAMQVGIE
LAEEVGGVID NCSSECHGPT VLAIQEVGHP GCTLGQVKNR ADVVVYWACN PQVAHPRHMS
RYTTYTSGYF RKEGREDRTI VVVDIRESET AKLADVFLKI KPGADFAVFN ALRAIVSGKG
DILPDEIGGV EKGQLLKLGD ILLGAKFGIF FTGVGLTHSR GKYKNVRAGI ELIDELNRHT
KYALSPLKGH WNVDGTCHIF SLTTGYPFAI DYSRGIAYYN PGETSGIDLL ERNEVDCCVV
VSTDIGAHFP RTSIERLAKI NTIVLDPYVS LTTPFAKIQL PGSIVGIDTQ GTAYRMDGIP
IHVKKILDSS VPSDTEILQR ILSEVRRIKK EQTV