Gene Mhun_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1988 
Symbol 
ID3924395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2243837 
End bp2245168 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content47% 
IMG OID637897597 
Productformylmethanofuran dehydrogenase subunit B 
Protein accessionYP_503417 
Protein GI88603239 
COG category[C] Energy production and conversion 
COG ID[COG1029] Formylmethanofuran dehydrogenase subunit B 
TIGRFAM ID[TIGR03129] formylmethanofuran dehydrogenase subunit B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.209103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.117203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG TAATAGAAAA TGTCGGATGT CCCTATTGCG GATGCTCCTG TGATGATGTC 
CGCATTACTG TTTCAGACGA TGGAAAGGAC ATTCTGGAAG TAGAAAACGT CTGTGCAATC
GGAACGGAAA TCTTCAAGCA CGGTTGTTCT AAGGATCGGA TCCGACTTCC CCGTATGAGA
CAACCGGATG GCTCCATGAA AGATATTTCC TACGAGGAAG CAATCGACTG GACTGCACGA
CATCTGCTTA AGGCCAAAAA ACCCCTCATG TACGGGTTTG GGTCTACCAA TTGTGAAGGT
CAGGCAGCAG CAGCACGTGT AATGGAAATT GCAGGGGGTA TGCTTGATAA CTGTGCAACT
ATCTGTCACG GACCATCGTT CCTTGCAATA TTCGACAACG GATATCCCAG CTGTACACTA
GGAGAAGTCA AGAACCGTGC AGACGTGATC GTCTACTGGG GGTCTAACCC AGCACATGCG
CACCCACGTC ATATGTCCCG GTACTCTATC TTTCCGCGTG GTTTTTTCAC CGGAAAGGGC
CAGAAAAAGA GGACTGTCAT TGTCATCGAT CCCCGGTTTA CTGACACAGC AAATGTAGCA
GATTATCATC TCCAGGTTAA ACAGGGTCAT GATTATGAAC TTTTCAATGC CTTCCGAATG
GTCATTCACG GCCATGGAAA AGACCTTCCT GATGAAGTCG CTGGAATTAA AAAAGAGACG
ATCCTTGAAG TTGCAGAGAT CATGAAGAAT GCCCGGTTTG GAACTACATT CTTCGGGATG
GGTCTGACTC ATACTGATGG AAGAAACCAT AATATCGACA TCGCTATCTC CCTGACTCGT
GACCTGAACA AGATCTCAAA ATGGACCATC ATGGCAATGA GAGGTCATTA TAACATTGCA
GGCCCTGGGG TGGTCTGGTC CTGGACATTC GGGTTCCCTT ACTGTCTTGA CCTTACCAAA
CAGAACCATG CCCACATGAA CCCTGGTGAG ACCAGTTCGG TTGATATGGC CATGCGTGAT
GAAGTCGATA TGTTCATTAA TATCGGAACC GACGCCGCTG CACACTTCCC CATTCCTGCA
GTAAAACAGC TTAAAAAACA CCCCTGGGTT ACTATTGACC CAAGCATCAA TATGGCATCC
GAGATATCTG ATCTGCACAT CCCAGTCTGT ATCTGTGGTG TTGATGTCGG TGGTATCGTC
TATCGAATGG ATAATGTGCC AATTCAGTTC AGAAAAGTCA TCGAACCACC GGAAGGTGTC
ATGGATGACG AGACTCTCCT GAATAAGATC GCTGACCGTA TGGAAGAACT GAAAGCGAAG
GGTGAAGCCT GA
 
Protein sequence
MPKVIENVGC PYCGCSCDDV RITVSDDGKD ILEVENVCAI GTEIFKHGCS KDRIRLPRMR 
QPDGSMKDIS YEEAIDWTAR HLLKAKKPLM YGFGSTNCEG QAAAARVMEI AGGMLDNCAT
ICHGPSFLAI FDNGYPSCTL GEVKNRADVI VYWGSNPAHA HPRHMSRYSI FPRGFFTGKG
QKKRTVIVID PRFTDTANVA DYHLQVKQGH DYELFNAFRM VIHGHGKDLP DEVAGIKKET
ILEVAEIMKN ARFGTTFFGM GLTHTDGRNH NIDIAISLTR DLNKISKWTI MAMRGHYNIA
GPGVVWSWTF GFPYCLDLTK QNHAHMNPGE TSSVDMAMRD EVDMFINIGT DAAAHFPIPA
VKQLKKHPWV TIDPSINMAS EISDLHIPVC ICGVDVGGIV YRMDNVPIQF RKVIEPPEGV
MDDETLLNKI ADRMEELKAK GEA