More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_3329 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  100 
 
 
382 aa  743    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  78.25 
 
 
382 aa  525  1e-148  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  55.56 
 
 
385 aa  342  4e-93  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  59.48 
 
 
412 aa  338  8e-92  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  56.5 
 
 
391 aa  335  5.999999999999999e-91  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  56.35 
 
 
391 aa  333  4e-90  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  42.47 
 
 
373 aa  268  1e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  44.2 
 
 
381 aa  258  1e-67  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  39.43 
 
 
391 aa  248  9e-65  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  43.04 
 
 
322 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  32.67 
 
 
347 aa  100  6e-20  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  31.06 
 
 
347 aa  99  1e-19  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  32.83 
 
 
364 aa  97.1  5e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  31.96 
 
 
347 aa  96.7  6e-19  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  30.21 
 
 
337 aa  94.4  3e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  33.55 
 
 
363 aa  94.4  3e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  30.38 
 
 
347 aa  93.6  5e-18  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  31.01 
 
 
337 aa  92.8  1e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  30.49 
 
 
332 aa  90.9  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  32 
 
 
335 aa  84  0.000000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  32.04 
 
 
388 aa  82  0.00000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  31.22 
 
 
392 aa  80.5  0.00000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4516  acyl-CoA dehydrogenase type 2  26.28 
 
 
395 aa  77  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.130533 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  27.63 
 
 
375 aa  72.4  0.00000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  28.31 
 
 
376 aa  72  0.00000000002  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  24.26 
 
 
379 aa  72  0.00000000002  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  25.37 
 
 
380 aa  70.9  0.00000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  26.8 
 
 
377 aa  70.9  0.00000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_009656  PSPA7_2915  hypothetical protein  26 
 
 
405 aa  70.9  0.00000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.281087  n/a   
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  26.72 
 
 
380 aa  70.9  0.00000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  28.86 
 
 
387 aa  69.7  0.00000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_008463  PA14_34300  DszC family monooxygenase  26 
 
 
405 aa  70.1  0.00000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.803163  normal  0.0145718 
 
 
-
 
NC_007952  Bxe_B1545  hypothetical protein  28.89 
 
 
416 aa  69.7  0.00000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.828601  normal  0.5845 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  24.38 
 
 
381 aa  69.3  0.0000000001  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  27.03 
 
 
386 aa  68.9  0.0000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_008255  CHU_3396  acyl-CoA dehydrogenase  25.07 
 
 
351 aa  69.3  0.0000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.581792  normal  0.0907936 
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  28.42 
 
 
377 aa  68.9  0.0000000001  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  27.92 
 
 
377 aa  68.6  0.0000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31490  Acyl-CoA dehydrogenase family protein  26.12 
 
 
402 aa  68.2  0.0000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  26.47 
 
 
385 aa  68.6  0.0000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  27.15 
 
 
379 aa  68.2  0.0000000003  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  26.73 
 
 
375 aa  68.2  0.0000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  27.71 
 
 
376 aa  67.8  0.0000000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  28.49 
 
 
377 aa  67.4  0.0000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  24.2 
 
 
380 aa  67.4  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  28.49 
 
 
377 aa  67.4  0.0000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5850  acyl-CoA dehydrogenase, C-terminal domain protein  30.36 
 
 
380 aa  67.4  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.856697 
 
 
-
 
NC_009440  Msed_2087  acyl-CoA dehydrogenase domain-containing protein  25.87 
 
 
378 aa  67  0.0000000005  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  30.59 
 
 
359 aa  67  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  26.36 
 
 
385 aa  67  0.0000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  28.8 
 
 
387 aa  66.6  0.0000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  30.95 
 
 
387 aa  66.6  0.0000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  27.11 
 
 
376 aa  66.6  0.0000000008  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  27.41 
 
 
376 aa  66.2  0.0000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  27.87 
 
 
377 aa  66.2  0.0000000009  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  23.74 
 
 
362 aa  66.2  0.0000000009  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_011988  Avi_5156  acyl-CoA dehydrogenase  25.76 
 
 
420 aa  66.2  0.000000001  Agrobacterium vitis S4  Bacteria  normal  0.0718281  n/a   
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  25.75 
 
 
375 aa  65.9  0.000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0906  acyl-CoA dehydrogenase type 2  27.85 
 
 
398 aa  65.9  0.000000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0889  Acyl-CoA dehydrogenase, type 2-like protein  27.85 
 
 
398 aa  65.9  0.000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  26.73 
 
 
375 aa  65.9  0.000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_009077  Mjls_0895  acyl-CoA dehydrogenase type 2  26.48 
 
 
398 aa  65.5  0.000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0424541 
 
 
-
 
NC_011885  Cyan7425_0063  Acyl-CoA dehydrogenase type 2 domain protein  23.66 
 
 
401 aa  65.1  0.000000002  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  26.54 
 
 
379 aa  65.5  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  26.01 
 
 
375 aa  65.5  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  29.08 
 
 
380 aa  65.1  0.000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_008726  Mvan_3173  acyl-CoA dehydrogenase type 2  28.01 
 
 
415 aa  65.5  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.203103  normal  0.0489615 
 
 
-
 
NC_011671  PHATR_25932  short chain acyl-coenzyme A dehydrogenase  26.51 
 
 
436 aa  65.5  0.000000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007493  RSP_0156  Acyl-CoA dehydrogenase  25.22 
 
 
379 aa  64.7  0.000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  27.6 
 
 
377 aa  64.7  0.000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_009719  Plav_2780  acyl-CoA dehydrogenase domain-containing protein  26.65 
 
 
390 aa  63.9  0.000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0393743 
 
 
-
 
NC_007958  RPD_3693  isovaleryl-CoA dehydrogenase  26.07 
 
 
390 aa  63.9  0.000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  23.91 
 
 
380 aa  63.5  0.000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3933  Acyl-CoA dehydrogenase-like  25.79 
 
 
390 aa  63.5  0.000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.218287  normal 
 
 
-
 
NC_013124  Afer_0732  acyl-CoA dehydrogenase domain protein  27.46 
 
 
379 aa  63.5  0.000000006  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6749  acyl-CoA dehydrogenase type 2  27.91 
 
 
412 aa  63.2  0.000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.144379 
 
 
-
 
NC_012791  Vapar_1903  Acyl-CoA dehydrogenase type 2 domain protein  28.84 
 
 
417 aa  63.2  0.000000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6515  Acyl-CoA dehydrogenase, type 2-like  27.91 
 
 
412 aa  63.2  0.000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0239  Acyl-CoA dehydrogenase-like  25.51 
 
 
397 aa  63.2  0.000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6338  acyl-CoA dehydrogenase type 2  27.91 
 
 
412 aa  62.8  0.000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  25 
 
 
375 aa  62.4  0.00000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2440  acyl-CoA dehydrogenase family protein  24.52 
 
 
395 aa  62.4  0.00000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0806323  n/a   
 
 
-
 
NC_013510  Tcur_1377  acyl-CoA dehydrogenase domain protein  28.89 
 
 
409 aa  62.8  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0469267  n/a   
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  24.7 
 
 
375 aa  62  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_007509  Bcep18194_C7499  Acyl-CoA dehydrogenase  29.08 
 
 
412 aa  62.4  0.00000001  Burkholderia sp. 383  Bacteria  normal  0.140498  normal  0.395305 
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  25.51 
 
 
381 aa  62.4  0.00000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  25.3 
 
 
375 aa  61.6  0.00000002  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_009512  Pput_2998  acyl-CoA dehydrogenase type 2  27.05 
 
 
410 aa  61.6  0.00000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0353  Acyl-CoA dehydrogenase, C-terminal  25.6 
 
 
401 aa  61.6  0.00000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.758482 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  25.6 
 
 
375 aa  61.6  0.00000002  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  24.7 
 
 
375 aa  62  0.00000002  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  26.94 
 
 
333 aa  62  0.00000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  25.91 
 
 
379 aa  61.6  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_007925  RPC_4263  acyl-CoA dehydrogenase-like  26.96 
 
 
390 aa  61.6  0.00000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.662141  normal  0.561312 
 
 
-
 
NC_009073  Pcal_1308  acyl-CoA dehydrogenase domain-containing protein  26.17 
 
 
407 aa  62  0.00000002  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0345991 
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  25.47 
 
 
383 aa  62  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_010511  M446_3936  acyl-CoA dehydrogenase domain-containing protein  27.43 
 
 
376 aa  61.2  0.00000003  Methylobacterium sp. 4-46  Bacteria  normal  0.132156  decreased coverage  0.00760667 
 
 
-
 
NC_002947  PP_2755  hypothetical protein  27.05 
 
 
414 aa  61.2  0.00000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2009  acyl-CoA dehydrogenase type 2  27.4 
 
 
411 aa  60.8  0.00000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0963467  hitchhiker  0.00351271 
 
 
-
 
NC_011004  Rpal_1804  acyl-CoA dehydrogenase domain protein  26.74 
 
 
390 aa  61.2  0.00000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392184  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>