Gene Sros_5850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5850 
Symbol 
ID8669144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6412216 
End bp6413358 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content73% 
IMG OID 
Productacyl-CoA dehydrogenase, C-terminal domain protein 
Protein accessionYP_003341328 
Protein GI271967132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.856697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTG AGCGTGTGAT GCCCACCACC GAGGCCCACG ACCTGCTGGA GCTGGTCCGT 
GAGCTGATCG CCAAGGAGGT GGCGCCCCGG GCGTCGGCCG ACGAGTCCGC GGGCCGCTTC
CCCCGCGAGG TGTTCACCAC CCTGGGCCGG GCCGGGCTGC TCGGACTGCC CTACCCCGAG
GAGCACGGTG GCGCCGCGCA GCCGTACGAG GTCTATCTCC AGGTGATCGA GGAGCTCGCG
GCTGGCTGGC TGGCGGTCGG TCTCGGCCTG TCGGTGCATA CCCTGTCCTG CTTCCCGGTG
GCCGCCTACG GCACGGACGC GCAGCGCGCC GCGCTGCTGC CGGAGATGCT CGGCGGCGAG
TGGCTGGGCG CCTACTGCCT GTCGGAGCCC CACTCCGGGT CCGACGCCGC CGCCCTGACC
ACCCGCGCGG TGCCCGACGC CGACGGCTAC GTCGTCGACG GGGTCAAGGC CTGGATCACC
CACGGCGGCG TCGCCGACTT CTACACCCTG ATGGCCCGCA CCTCCGACGA CGGCGGGCGG
GGCATCTCCT GCTTCCACGT TCCCGCCGGG ACGGAGGGGC TGTCGTACGG CGTGCCCGAG
CGGAAGATGG GGATGAGGTC CTCGCCGACC GCCCAGGTCC GGTTCGACTC GGTACGGCTC
GCCTCCGACG CGCTGCTGGG CGCGGAGGGG GAGGGCTTCC GCATCGCCAT GGCCGCCCTG
GACGGCGGCA GGCTCGGCAT CGCCGCCTGC GCCGTCGGCG TGGCCCAGGC GGCCCTCGAC
GCCGCCACCG GCTACGCCAA GGAGCGCCGC CAGTTCGGCT CCCGCATCGC CGACTTCCAG
GGGGTCGGCT TCATGCTCGC CGACATGGCC ACCCAGATCG CCGCCGCCCG TGCCCTCTAC
CTCGACGCCG CCCGCCTGCG CGACGCGGGC CGGCCGTACG GCACCCAGGC CGCCATGGCC
AAGCTGTTCG CCACCGACAT GTGCATGAAG GTCACCACCG ACGCCGTCCA GGTTCTCGGC
GGCTACGGCT ACGTCGAGGA CTTCCCGGTC GAGCGCTACA TGCGGGAGGC GAAGGTCCTG
CAGATCGTCG AGGGCACCAA CCAGGTCCAG CGCGTGGTGA TCAGCCGCGC CCTCGCGCGG
TAG
 
Protein sequence
MTVERVMPTT EAHDLLELVR ELIAKEVAPR ASADESAGRF PREVFTTLGR AGLLGLPYPE 
EHGGAAQPYE VYLQVIEELA AGWLAVGLGL SVHTLSCFPV AAYGTDAQRA ALLPEMLGGE
WLGAYCLSEP HSGSDAAALT TRAVPDADGY VVDGVKAWIT HGGVADFYTL MARTSDDGGR
GISCFHVPAG TEGLSYGVPE RKMGMRSSPT AQVRFDSVRL ASDALLGAEG EGFRIAMAAL
DGGRLGIAAC AVGVAQAALD AATGYAKERR QFGSRIADFQ GVGFMLADMA TQIAAARALY
LDAARLRDAG RPYGTQAAMA KLFATDMCMK VTTDAVQVLG GYGYVEDFPV ERYMREAKVL
QIVEGTNQVQ RVVISRALAR