Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2998 |
Symbol | |
ID | 5192822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3386754 |
End bp | 3387986 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640587444 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001268310 |
Protein GI | 148548208 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGT CACAACCCGC CGATCTGCGC GAGCAGTTCA GCTCGGCGCC TCGGCGCCCG GCACAGATCA TCCGTAGCGA CGCCGAAGCC ATCGAGGTGG CGCAGCGCTT GGCCGAGGAT TTTGCCCGTG AGGCAGCCTG GCGTGATCGC GAGCGGCGCC TGCCCTGGGA GGAACTGGAT CGCTTCTCCG AAAGCGGTCT GTGGGCAATC AGCGTGCCCA AGGCGCACGG CGGCGCCGGG GTATCTTATG TCACCCTCAG CGAGGTGATC GCGACCATCT CCGCCGCCGA TTCATCGCTC GGCCAGTTGC CGCAGAACCA CTTTGGTGTG CTCAGCAACC TCGGCCTGAC CGGCAGCGAG GCGCAGAAGC GCCGCTACTA CGCCAAGGTG CTGCAAGGCT ACCGTTTCGG TAACGCCTTT TCCGAAGCGC GCAGCCAGTA CGTCACCACC TTCCAGACGC AGATCCGCTT CGACGGCGAC AGCGCCGTGC TCGATGGCGA GAAGGCCTAC TGCACGGGGG CACTGTTCGC CCACATCGTC CCGGTCGCGG GTGTCGACGA GGAGGGCCGC CCGCACATCG CCTTCGTGCC ACGCGATGCA GCTGGCCTGA CGGTGATCGA CAGTTGGGAT GGCTTCGGCC AGCGCATCAC AGCCAGCGGC CAGGTGCGTA TCGAAGGCGT GCGAGTGCCA GCGAGCGAGG TGATACCGGC CTGGAAGGCC TACGACCAGC CAACCGCTGA TGGCCCGATC TCGCAGATCA TCCAGGCCGC CGTGGACACC GGCATCGCCC GTGGCGCCTT TGCCGAAACC CTGCGCGTGG CGCGTCAGGC ACGCCCCTGG GTCGACAGCG GCTTGCAGCA CGGCTGGCAG GATCCACTTG GCCAGGCGCT AATCGGCGAG CTGGCCTGGC GCCTGCAGGC GGCCGAGGCG ATCTTGCAGC GCGCTGCCGA GGCGGTCGAT CGCGCCGTCG CCGAGCCTGG CGAAGAGCTC GTTGCTGAAG CCTCAGTGGT GGTCGGCCAG GCCAAGGTGC TGTCTACCGA GATTTCCCTT GAGGCGTCCA GTCGCCTGCT GGAGCTGGGC GGCACGCGCA GCGTCTCGGC CAGCCAGGGG CTGGACCGCT TCTGGCGCAA TGCGCGCACC CACACGCTGC ATGACCCGGT GCGCTGGAAG TACCACCTGG TCGGCAATCA ACTGCTCAAC GGCATCAAGC CGCAACGTCA TTCCTGGAAC TGA
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Protein sequence | MTQSQPADLR EQFSSAPRRP AQIIRSDAEA IEVAQRLAED FAREAAWRDR ERRLPWEELD RFSESGLWAI SVPKAHGGAG VSYVTLSEVI ATISAADSSL GQLPQNHFGV LSNLGLTGSE AQKRRYYAKV LQGYRFGNAF SEARSQYVTT FQTQIRFDGD SAVLDGEKAY CTGALFAHIV PVAGVDEEGR PHIAFVPRDA AGLTVIDSWD GFGQRITASG QVRIEGVRVP ASEVIPAWKA YDQPTADGPI SQIIQAAVDT GIARGAFAET LRVARQARPW VDSGLQHGWQ DPLGQALIGE LAWRLQAAEA ILQRAAEAVD RAVAEPGEEL VAEASVVVGQ AKVLSTEISL EASSRLLELG GTRSVSASQG LDRFWRNART HTLHDPVRWK YHLVGNQLLN GIKPQRHSWN
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