Gene Pput_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2998 
Symbol 
ID5192822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3386754 
End bp3387986 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID640587444 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001268310 
Protein GI148548208 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGT CACAACCCGC CGATCTGCGC GAGCAGTTCA GCTCGGCGCC TCGGCGCCCG 
GCACAGATCA TCCGTAGCGA CGCCGAAGCC ATCGAGGTGG CGCAGCGCTT GGCCGAGGAT
TTTGCCCGTG AGGCAGCCTG GCGTGATCGC GAGCGGCGCC TGCCCTGGGA GGAACTGGAT
CGCTTCTCCG AAAGCGGTCT GTGGGCAATC AGCGTGCCCA AGGCGCACGG CGGCGCCGGG
GTATCTTATG TCACCCTCAG CGAGGTGATC GCGACCATCT CCGCCGCCGA TTCATCGCTC
GGCCAGTTGC CGCAGAACCA CTTTGGTGTG CTCAGCAACC TCGGCCTGAC CGGCAGCGAG
GCGCAGAAGC GCCGCTACTA CGCCAAGGTG CTGCAAGGCT ACCGTTTCGG TAACGCCTTT
TCCGAAGCGC GCAGCCAGTA CGTCACCACC TTCCAGACGC AGATCCGCTT CGACGGCGAC
AGCGCCGTGC TCGATGGCGA GAAGGCCTAC TGCACGGGGG CACTGTTCGC CCACATCGTC
CCGGTCGCGG GTGTCGACGA GGAGGGCCGC CCGCACATCG CCTTCGTGCC ACGCGATGCA
GCTGGCCTGA CGGTGATCGA CAGTTGGGAT GGCTTCGGCC AGCGCATCAC AGCCAGCGGC
CAGGTGCGTA TCGAAGGCGT GCGAGTGCCA GCGAGCGAGG TGATACCGGC CTGGAAGGCC
TACGACCAGC CAACCGCTGA TGGCCCGATC TCGCAGATCA TCCAGGCCGC CGTGGACACC
GGCATCGCCC GTGGCGCCTT TGCCGAAACC CTGCGCGTGG CGCGTCAGGC ACGCCCCTGG
GTCGACAGCG GCTTGCAGCA CGGCTGGCAG GATCCACTTG GCCAGGCGCT AATCGGCGAG
CTGGCCTGGC GCCTGCAGGC GGCCGAGGCG ATCTTGCAGC GCGCTGCCGA GGCGGTCGAT
CGCGCCGTCG CCGAGCCTGG CGAAGAGCTC GTTGCTGAAG CCTCAGTGGT GGTCGGCCAG
GCCAAGGTGC TGTCTACCGA GATTTCCCTT GAGGCGTCCA GTCGCCTGCT GGAGCTGGGC
GGCACGCGCA GCGTCTCGGC CAGCCAGGGG CTGGACCGCT TCTGGCGCAA TGCGCGCACC
CACACGCTGC ATGACCCGGT GCGCTGGAAG TACCACCTGG TCGGCAATCA ACTGCTCAAC
GGCATCAAGC CGCAACGTCA TTCCTGGAAC TGA
 
Protein sequence
MTQSQPADLR EQFSSAPRRP AQIIRSDAEA IEVAQRLAED FAREAAWRDR ERRLPWEELD 
RFSESGLWAI SVPKAHGGAG VSYVTLSEVI ATISAADSSL GQLPQNHFGV LSNLGLTGSE
AQKRRYYAKV LQGYRFGNAF SEARSQYVTT FQTQIRFDGD SAVLDGEKAY CTGALFAHIV
PVAGVDEEGR PHIAFVPRDA AGLTVIDSWD GFGQRITASG QVRIEGVRVP ASEVIPAWKA
YDQPTADGPI SQIIQAAVDT GIARGAFAET LRVARQARPW VDSGLQHGWQ DPLGQALIGE
LAWRLQAAEA ILQRAAEAVD RAVAEPGEEL VAEASVVVGQ AKVLSTEISL EASSRLLELG
GTRSVSASQG LDRFWRNART HTLHDPVRWK YHLVGNQLLN GIKPQRHSWN