69 homologs were found in PanDaTox collection
for query gene Maqu_3133 on replicon NC_008740
Organism: Marinobacter aquaeolei VT8



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008740  Maqu_3133  hypothetical protein  100 
 
 
237 aa  493  9.999999999999999e-139  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3628  putative transcriptional regulator, Crp/Fnr family  31.58 
 
 
203 aa  76.3  0.0000000000004  Variovorax paradoxus S110  Bacteria  normal  0.531626  n/a   
 
 
-
 
NC_013162  Coch_0582  cyclic nucleotide-binding protein  29.17 
 
 
194 aa  65.5  0.0000000006  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1677  cyclic nucleotide binding regulatory protein  27.65 
 
 
175 aa  60.1  0.00000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.24852  normal 
 
 
-
 
NC_013730  Slin_3834  putative transcriptional regulator, Crp/Fnr family  25.88 
 
 
191 aa  57  0.0000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1779  cyclic nucleotide-binding  26.71 
 
 
192 aa  56.6  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.705859  normal  0.0224927 
 
 
-
 
NC_013132  Cpin_2485  putative transcriptional regulator, Crp/Fnr family  53.49 
 
 
189 aa  56.2  0.0000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.497978 
 
 
-
 
NC_011312  VSAL_I0410  putative DNA-binding protein  25.56 
 
 
190 aa  55.1  0.000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.269856  n/a   
 
 
-
 
NC_011725  BCB4264_A1286  cyclic nucleotide binding regulatory protein  26.14 
 
 
190 aa  55.1  0.000001  Bacillus cereus B4264  Bacteria  normal  0.0475736  n/a   
 
 
-
 
NC_013132  Cpin_2316  putative transcriptional regulator, Crp/Fnr family  37.1 
 
 
191 aa  54.3  0.000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.144016  normal 
 
 
-
 
NC_007413  Ava_1692  cyclic nucleotide-binding protein  28.12 
 
 
196 aa  53.1  0.000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5637  putative transcriptional regulator, Crp/Fnr family  25.41 
 
 
189 aa  53.5  0.000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236441  normal  0.598189 
 
 
-
 
NC_013730  Slin_2881  putative transcriptional regulator, Crp/Fnr family  24.86 
 
 
187 aa  53.5  0.000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2769  cyclic nucleotide-binding  28.12 
 
 
192 aa  53.5  0.000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.311339  normal 
 
 
-
 
NC_008255  CHU_0397  cyclic nucleotide binding regulatory protein  28.48 
 
 
185 aa  53.1  0.000004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.081454  normal  0.179633 
 
 
-
 
NC_008255  CHU_1116  cyclic nucleotide binding regulatory protein  46.94 
 
 
196 aa  52  0.000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.221174  normal 
 
 
-
 
NC_009441  Fjoh_3107  cyclic nucleotide-binding protein  20.11 
 
 
208 aa  51.2  0.00001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3164  cyclic nucleotide-binding protein  25.87 
 
 
199 aa  51.6  0.00001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1138  cyclic nucleotide-binding protein  25.41 
 
 
191 aa  51.6  0.00001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0914153  n/a   
 
 
-
 
NC_008228  Patl_2773  cyclic nucleotide-binding protein  27.27 
 
 
198 aa  50.4  0.00002  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.724509  n/a   
 
 
-
 
NC_013132  Cpin_1390  putative transcriptional regulator, Crp/Fnr family  24.12 
 
 
208 aa  49.3  0.00005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0777  putative transcriptional regulator, Crp/Fnr family  32.89 
 
 
198 aa  48.9  0.00006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.438607  normal  0.285853 
 
 
-
 
NC_013162  Coch_0532  cyclic nucleotide-binding protein  24.29 
 
 
189 aa  49.3  0.00006  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1771  putative transcriptional regulator, Crp/Fnr family  31.43 
 
 
188 aa  48.5  0.00008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.207903 
 
 
-
 
NC_013132  Cpin_4194  putative transcriptional regulator, Crp/Fnr family  23.94 
 
 
194 aa  48.1  0.0001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.153014  normal  0.0498746 
 
 
-
 
NC_009441  Fjoh_2842  cyclic nucleotide-binding protein  23.4 
 
 
191 aa  47.8  0.0001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.814111  n/a   
 
 
-
 
NC_009783  VIBHAR_00763  hypothetical protein  25.17 
 
 
190 aa  47.4  0.0002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_3955  cyclic nucleotide-binding protein  47.62 
 
 
200 aa  47.4  0.0002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3750  putative transcriptional regulator, Crp/Fnr family  24.66 
 
 
201 aa  47  0.0002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.44373  normal 
 
 
-
 
NC_008255  CHU_1452  cyclic nucleotide binding regulatory protein  26.06 
 
 
192 aa  47.4  0.0002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.177546  normal  0.82146 
 
 
-
 
NC_013132  Cpin_3466  putative transcriptional regulator, Crp/Fnr family  32.84 
 
 
196 aa  47  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.118195 
 
 
-
 
NC_009441  Fjoh_3217  cyclic nucleotide-binding protein  23.7 
 
 
189 aa  46.6  0.0003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.336611  n/a   
 
 
-
 
NC_013132  Cpin_5018  putative transcriptional regulator, Crp/Fnr family  23.42 
 
 
194 aa  46.6  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.213439  normal  0.0399909 
 
 
-
 
NC_013061  Phep_3758  cyclic nucleotide-binding  21.26 
 
 
199 aa  47  0.0003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4303  cyclic nucleotide-binding protein  23.67 
 
 
201 aa  46.6  0.0004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.814789  n/a   
 
 
-
 
NC_013456  VEA_001710  cAMP-binding protein  47.5 
 
 
192 aa  46.2  0.0004  Vibrio sp. Ex25  Bacteria  normal  0.689486  n/a   
 
 
-
 
NC_013730  Slin_5714  putative transcriptional regulator, Crp/Fnr family  24.83 
 
 
194 aa  46.6  0.0004  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00341706 
 
 
-
 
NC_013132  Cpin_2676  putative transcriptional regulator, Crp/Fnr family  35.42 
 
 
192 aa  46.2  0.0005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.320981  normal 
 
 
-
 
NC_008255  CHU_2876  cyclic nucleotide binding regulatory protein  31.34 
 
 
202 aa  45.8  0.0006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.132112  decreased coverage  0.0000795763 
 
 
-
 
NC_013132  Cpin_1544  putative transcriptional regulator, Crp/Fnr family  33.82 
 
 
194 aa  45.8  0.0006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2799  cyclic nucleotide-binding domain-containing protein  26.21 
 
 
202 aa  45.1  0.0009  Polaromonas sp. JS666  Bacteria  normal  0.208629  normal  0.300768 
 
 
-
 
NC_013061  Phep_1351  cyclic nucleotide-binding  46.51 
 
 
188 aa  44.7  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0484  putative transcriptional regulator, Crp/Fnr family  22.08 
 
 
189 aa  44.7  0.001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.46296  normal 
 
 
-
 
NC_013730  Slin_2727  putative transcriptional regulator, Crp/Fnr family  24.14 
 
 
197 aa  45.1  0.001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0503116 
 
 
-
 
NC_008255  CHU_2257  cyclic nucleotide binding regulatory protein  30 
 
 
190 aa  44.7  0.001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0921421  normal 
 
 
-
 
NC_013132  Cpin_4002  putative transcriptional regulator, Crp/Fnr family  26.59 
 
 
187 aa  45.1  0.001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000843344  normal  0.0193683 
 
 
-
 
NC_013132  Cpin_6712  putative transcriptional regulator, Crp/Fnr family  47.62 
 
 
194 aa  45.1  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4692  putative transcriptional regulator, Crp/Fnr family  23.6 
 
 
199 aa  44.7  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.177922  hitchhiker  0.00287495 
 
 
-
 
NC_013132  Cpin_1379  putative transcriptional regulator, Crp/Fnr family  25 
 
 
187 aa  44.7  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1090  cyclic nucleotide binding regulatory protein  23.38 
 
 
191 aa  44.3  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.171648 
 
 
-
 
NC_013730  Slin_2093  putative transcriptional regulator, Crp/Fnr family  33.33 
 
 
198 aa  44.3  0.002  Spirosoma linguale DSM 74  Bacteria  normal  0.177732  normal  0.144661 
 
 
-
 
NC_013132  Cpin_6650  putative transcriptional regulator, Crp/Fnr family  24.16 
 
 
196 aa  44.3  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6135  putative transcriptional regulator, Crp/Fnr family  34.29 
 
 
192 aa  44.3  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3193  cyclic nucleotide-binding protein  35.42 
 
 
192 aa  43.5  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0678  cyclic nucleotide binding-regulatory protein  40.48 
 
 
193 aa  43.5  0.003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_1392  cyclic nucleotide-binding protein  20.57 
 
 
193 aa  43.5  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0639788  n/a   
 
 
-
 
NC_013132  Cpin_4453  putative transcriptional regulator, Crp/Fnr family  37.5 
 
 
195 aa  43.5  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0381566  normal  0.0628964 
 
 
-
 
NC_013132  Cpin_3646  putative transcriptional regulator, Crp/Fnr family  28.99 
 
 
200 aa  43.5  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0908146  normal  0.454676 
 
 
-
 
NC_013132  Cpin_2892  putative transcriptional regulator, Crp/Fnr family  35.42 
 
 
192 aa  43.5  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5631  putative transcriptional regulator, Crp/Fnr family  39.58 
 
 
197 aa  43.1  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.344618  normal  0.805191 
 
 
-
 
NC_008255  CHU_2485  cyclic nucleotide binding regulatory protein  22.41 
 
 
188 aa  43.1  0.004  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00499605  decreased coverage  0.00906372 
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  27.17 
 
 
245 aa  43.1  0.004  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_013037  Dfer_1290  putative transcriptional regulator, Crp/Fnr family  23.56 
 
 
197 aa  42.7  0.005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.981443  normal  0.710013 
 
 
-
 
NC_014230  CA2559_10168  hypothetical protein  26.04 
 
 
189 aa  42.4  0.006  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.578038  n/a   
 
 
-
 
NC_009441  Fjoh_4064  cyclic nucleotide-binding protein  44.19 
 
 
189 aa  42.4  0.007  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3585  putative transcriptional regulator, Crp/Fnr family  35.42 
 
 
191 aa  42  0.009  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0241751 
 
 
-
 
NC_009441  Fjoh_3294  cyclic nucleotide-binding protein  28.72 
 
 
187 aa  41.6  0.01  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0851  putative transcriptional regulator, Crp/Fnr family  23.53 
 
 
199 aa  41.6  0.01  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1123  cyclic nucleotide binding regulatory protein  30.56 
 
 
185 aa  41.6  0.01  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.223037  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>