| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6135 |
|---|
| Symbol | |
|---|
| ID | 8362317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7736952 |
|---|
| End bp | 7737530 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968266 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003125745 |
|---|
| Protein GI | 256425092 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCG CATTAAGCAC ATACCTTAAA GAAAGAACAT ACCTTACGCC GCAGGAACTG
GGGCTTATAG AACAATATTA CACTAGCCGT TATTTAAAGA AGAAAGAACA CCTGTTACAG
GAGGGAGAGA TCTGCCGGCA TAGCGGATTT GTAGTAAAAG GTTGCCTGCG TACTTATCGT
GTGGATGAAG AAGGGAAGGA GCATACCTTA AAATTTGTCA TAGAGAACTG GTGGGCCTAT
GAACCGGAGA GCTATAGCAA TGGTACCCCC TCCGCATTTA ATATTCAGGC ACTGGAAGAC
ACTGAACTGA TACTTTGCCT GAAGGATGAT TTTCAATACC TGCTGGAAAG AATACCCAAT
CTCAGGGTGC TGACAGAAAA ACTCCAATCT AATAGCTTTA ATGCCAGTCA GCAGCGGATC
TATCACCAGA TCGGACATAG TCCGGAGGAG CGCTATAAGT CGTTCATAGC CGAATATCCG
GATATCTTTA ACAGGGTACC CCTGCACATG CTGGCTTCTT ATCTGGGGAT GTCCAGGGAG
ACAATCACCC GTATACGGGC ACATTATGCA AAGAAATAA
|
|---|
| Protein sequence | MFTALSTYLK ERTYLTPQEL GLIEQYYTSR YLKKKEHLLQ EGEICRHSGF VVKGCLRTYR
VDEEGKEHTL KFVIENWWAY EPESYSNGTP SAFNIQALED TELILCLKDD FQYLLERIPN
LRVLTEKLQS NSFNASQQRI YHQIGHSPEE RYKSFIAEYP DIFNRVPLHM LASYLGMSRE
TITRIRAHYA KK
|
|---|
| |