| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3628 |
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| Symbol | |
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| ID | 7970703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3837437 |
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| End bp | 3838048 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794213 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002945511 |
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| Protein GI | 239816601 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.531626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCGA CGGGCGCCGA ATCCGCAGGC CACGCATGGG CGCTGGCGCT CGAGCGGCGC
TTCCCGGAAC TGGCGCCTGC CGCGCTGGCT GCACTGGCCG GCCAGGCGCA GCGCACCACG
CTGGCGGCCC ACGCCACGCT GCTGGCGGCC GGGGAGCCGT GGCAGCATGC CTTCTGGGTG
GAGCAGGGGC TGCTGCGGCT TTTCTACATC GACAGCGAAG GCCGCGAGTC GAACAAGAAC
TTCCATGCCG AGGATGCGTT CATCTGGCCC GTGACCGAGC TGCTGCGCCG CGAGCCCGCA
GCCTTCTTCA TTGCGGCGCT GGCGCCGGCC ATCGTGTGGC GCCTTCCGTA TGCCGCGCTC
GAAGCCGCCG TGGCGCACCT GCCTTCATGG ACCGCGCTGC AGCTTCATGC GCTGGCGGGA
TTGCTCGACG ACAAGATGCG GCGCGAGCAG GTCTTCCTGC AGTGCACCGC GCGCCAGCGC
TACGAGGCGC TGCTGCGCGA GCGGCCCGAA TGGACGCAGC GCATTCCGCT GCGGCACCTG
GCGTCGTACC TGGGAATGAC CGATGTCTCG TTGTCGCGGC TGCGCGCAGG CATGGGGCTT
AACGACGGTT AA
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| Protein sequence | MRPTGAESAG HAWALALERR FPELAPAALA ALAGQAQRTT LAAHATLLAA GEPWQHAFWV
EQGLLRLFYI DSEGRESNKN FHAEDAFIWP VTELLRREPA AFFIAALAPA IVWRLPYAAL
EAAVAHLPSW TALQLHALAG LLDDKMRREQ VFLQCTARQR YEALLRERPE WTQRIPLRHL
ASYLGMTDVS LSRLRAGMGL NDG
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