More than 300 homologs were found in PanDaTox collection
for query gene Dshi_2602 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_2602  acyl-CoA dehydrogenase  100 
 
 
401 aa  819    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0180568 
 
 
-
 
NC_012791  Vapar_3255  acyl-CoA dehydrogenase domain protein  35.56 
 
 
384 aa  227  3e-58  Variovorax paradoxus S110  Bacteria  normal  0.616941  n/a   
 
 
-
 
NC_010002  Daci_3693  acyl-CoA dehydrogenase domain-containing protein  35.73 
 
 
388 aa  226  6e-58  Delftia acidovorans SPH-1  Bacteria  normal  0.625354  normal  0.0697869 
 
 
-
 
NC_011992  Dtpsy_1811  acyl-CoA dehydrogenase domain protein  35.2 
 
 
388 aa  223  4e-57  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  35.26 
 
 
385 aa  223  4e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_008782  Ajs_2007  acyl-CoA dehydrogenase domain-containing protein  34.93 
 
 
388 aa  221  9.999999999999999e-57  Acidovorax sp. JS42  Bacteria  normal  0.510402  normal  0.124271 
 
 
-
 
NC_010717  PXO_01704  acyl-CoA dehydrogenase family member 8  34.93 
 
 
393 aa  221  3e-56  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.791292  n/a   
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  34.31 
 
 
380 aa  219  6e-56  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
385 aa  218  2e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2602  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
388 aa  217  2.9999999999999998e-55  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.000586554  normal  0.488782 
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  34.99 
 
 
385 aa  216  8e-55  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  33.88 
 
 
385 aa  216  8e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_008254  Meso_0589  acyl-CoA dehydrogenase-like  34.22 
 
 
380 aa  215  9e-55  Chelativorans sp. BNC1  Bacteria  normal  0.371996  n/a   
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  34.42 
 
 
385 aa  213  2.9999999999999995e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  34.49 
 
 
379 aa  213  3.9999999999999995e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_010505  Mrad2831_3784  acyl-CoA dehydrogenase domain-containing protein  35.29 
 
 
381 aa  213  3.9999999999999995e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0514629  normal  0.596674 
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  34.16 
 
 
385 aa  212  7.999999999999999e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  34.22 
 
 
379 aa  212  7.999999999999999e-54  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_009667  Oant_1871  acyl-CoA dehydrogenase domain-containing protein  34.75 
 
 
385 aa  212  9e-54  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3200  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
385 aa  211  2e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.393512  hitchhiker  0.00650034 
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  33.88 
 
 
385 aa  211  2e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  33.88 
 
 
385 aa  211  2e-53  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
385 aa  211  2e-53  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_008700  Sama_1377  butyryl-CoA dehydrogenase  33.88 
 
 
385 aa  211  2e-53  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0267981 
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  33.88 
 
 
385 aa  210  3e-53  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
385 aa  209  5e-53  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
385 aa  209  5e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
385 aa  209  6e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  33.6 
 
 
385 aa  209  6e-53  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_007493  RSP_0156  Acyl-CoA dehydrogenase  34.22 
 
 
379 aa  208  2e-52  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  33.42 
 
 
380 aa  207  2e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_008687  Pden_4480  acyl-CoA dehydrogenase domain-containing protein  34.93 
 
 
381 aa  207  2e-52  Paracoccus denitrificans PD1222  Bacteria  normal  0.155011  normal 
 
 
-
 
NC_011138  MADE_01905  Acyl-CoA dehydrogenase family protein  33.97 
 
 
397 aa  207  3e-52  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.271746  n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  33.61 
 
 
385 aa  207  3e-52  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2190  acyl-CoA dehydrogenase domain-containing protein  34.49 
 
 
380 aa  207  4e-52  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.565732 
 
 
-
 
NC_009505  BOV_1275  acyl-CoA dehydrogenase  33.95 
 
 
385 aa  206  6e-52  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5850  acyl-CoA dehydrogenase, C-terminal domain protein  35.29 
 
 
380 aa  205  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.856697 
 
 
-
 
NC_009719  Plav_2898  acyl-CoA dehydrogenase domain-containing protein  33.24 
 
 
379 aa  204  2e-51  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000249127 
 
 
-
 
NC_013441  Gbro_3901  acyl-CoA dehydrogenase domain protein  34.77 
 
 
392 aa  204  2e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3937  acyl-CoA dehydrogenase domain protein  33.6 
 
 
385 aa  204  3e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.818683  n/a   
 
 
-
 
NC_013947  Snas_3174  acyl-CoA dehydrogenase domain-containing protein  32.89 
 
 
383 aa  203  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000929019  hitchhiker  0.000000000938929 
 
 
-
 
NC_014158  Tpau_3069  acyl-CoA dehydrogenase domain protein  32.89 
 
 
387 aa  203  5e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.117634  n/a   
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
379 aa  202  8e-51  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  31.58 
 
 
388 aa  202  9.999999999999999e-51  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4241  acyl-CoA dehydrogenase domain-containing protein  32.89 
 
 
382 aa  200  3e-50  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0617  acyl-CoA dehydrogenase domain-containing protein  32.36 
 
 
380 aa  200  3e-50  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.432927  normal 
 
 
-
 
NC_007778  RPB_2120  Acyl-CoA dehydrogenase-like  33.33 
 
 
382 aa  200  3.9999999999999996e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.270517  normal  0.533217 
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  34.51 
 
 
387 aa  200  3.9999999999999996e-50  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  32.61 
 
 
382 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_007958  RPD_3301  acyl-CoA dehydrogenase-like  32.8 
 
 
381 aa  198  1.0000000000000001e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.168826 
 
 
-
 
NC_012803  Mlut_02820  acyl-CoA dehydrogenase  31.55 
 
 
377 aa  197  2.0000000000000003e-49  Micrococcus luteus NCTC 2665  Bacteria  normal  0.986779  n/a   
 
 
-
 
NC_009511  Swit_0650  acyl-CoA dehydrogenase domain-containing protein  31.03 
 
 
381 aa  197  3e-49  Sphingomonas wittichii RW1  Bacteria  normal  0.187966  normal 
 
 
-
 
NC_008146  Mmcs_1063  acyl-CoA dehydrogenase-like protein  33.24 
 
 
388 aa  197  4.0000000000000005e-49  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1079  acyl-CoA dehydrogenase domain-containing protein  33.24 
 
 
388 aa  197  4.0000000000000005e-49  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0773066 
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
387 aa  196  6e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_009077  Mjls_1090  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
388 aa  196  7e-49  Mycobacterium sp. JLS  Bacteria  normal  0.992341  normal 
 
 
-
 
NC_009485  BBta_3579  acyl-CoA dehydrogenase  32.27 
 
 
381 aa  195  9e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.740274 
 
 
-
 
NC_007964  Nham_2558  acyl-CoA dehydrogenase-like  32.27 
 
 
381 aa  195  1e-48  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10766  acyl-CoA dehydrogenase fadE9  33.24 
 
 
390 aa  194  2e-48  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000000022778  normal 
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  31.55 
 
 
384 aa  194  2e-48  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0089  acyl-CoA dehydrogenase domain-containing protein  32.98 
 
 
380 aa  194  2e-48  Mycobacterium sp. JLS  Bacteria  normal  normal  0.372364 
 
 
-
 
NC_008146  Mmcs_0099  acyl-CoA dehydrogenase-like protein  32.98 
 
 
380 aa  194  2e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0220  acyl-CoA dehydrogenase domain protein  33.69 
 
 
388 aa  194  2e-48  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.581384  normal 
 
 
-
 
NC_008705  Mkms_0108  acyl-CoA dehydrogenase domain-containing protein  32.98 
 
 
380 aa  194  2e-48  Mycobacterium sp. KMS  Bacteria  normal  normal  0.255375 
 
 
-
 
NC_013159  Svir_33630  acyl-CoA dehydrogenase  33.06 
 
 
386 aa  194  3e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.732719 
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  32.63 
 
 
383 aa  192  1e-47  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1103  acyl-CoA dehydrogenase-like  31.02 
 
 
381 aa  192  1e-47  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6081  acyl-CoA dehydrogenase domain protein  31.64 
 
 
381 aa  191  2e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.517442  normal 
 
 
-
 
NC_009784  VIBHAR_05484  acyl-CoA dehydrogenase  31.68 
 
 
384 aa  190  4e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp0931  hypothetical protein  31.06 
 
 
384 aa  190  5e-47  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0900  hypothetical protein  31.06 
 
 
384 aa  189  5.999999999999999e-47  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  33.25 
 
 
390 aa  189  9e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_008786  Veis_3538  butyryl-CoA dehydrogenase  33.68 
 
 
386 aa  189  1e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.689512  normal  0.938482 
 
 
-
 
NC_008786  Veis_0882  acyl-CoA dehydrogenase domain-containing protein  32.09 
 
 
381 aa  188  1e-46  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.000390729  normal  0.405813 
 
 
-
 
NC_013743  Htur_2576  acyl-CoA dehydrogenase domain protein  32.88 
 
 
378 aa  188  2e-46  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2132  butyryl-CoA dehydrogenase  32.12 
 
 
388 aa  188  2e-46  Marinobacter aquaeolei VT8  Bacteria  normal  0.627987  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  31.56 
 
 
380 aa  187  3e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_4943  acyl-CoA dehydrogenase domain-containing protein  33.52 
 
 
380 aa  187  3e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.218623  normal  0.894762 
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  29.41 
 
 
384 aa  187  3e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1242  acyl-CoA dehydrogenase domain protein  33.07 
 
 
379 aa  187  3e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  0.176039  n/a   
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  31.38 
 
 
380 aa  187  4e-46  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_009439  Pmen_1375  acyl-CoA dehydrogenase domain-containing protein  32.89 
 
 
387 aa  186  4e-46  Pseudomonas mendocina ymp  Bacteria  normal  0.178062  normal  0.0980928 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  31.56 
 
 
379 aa  186  5e-46  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  32 
 
 
377 aa  186  6e-46  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  32 
 
 
377 aa  186  6e-46  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_009484  Acry_0623  acyl-CoA dehydrogenase domain-containing protein  31.13 
 
 
391 aa  186  8e-46  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4372  acyl-CoA dehydrogenase domain protein  31.27 
 
 
374 aa  186  9e-46  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.367452  n/a   
 
 
-
 
NC_014165  Tbis_1814  acyl-CoA dehydrogenase domain-containing protein  33.88 
 
 
381 aa  185  1.0000000000000001e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.283341  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  28.84 
 
 
377 aa  184  2.0000000000000003e-45  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1750  acyl-CoA dehydrogenase  31.51 
 
 
381 aa  184  3e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.317107 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  31.71 
 
 
377 aa  183  5.0000000000000004e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5326  acyl-CoA dehydrogenase domain protein  31.73 
 
 
382 aa  183  5.0000000000000004e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.777784 
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  29.79 
 
 
378 aa  183  5.0000000000000004e-45  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  31.06 
 
 
418 aa  182  7e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  28.84 
 
 
390 aa  182  7e-45  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  31.73 
 
 
376 aa  182  9.000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0966  acyl-CoA dehydrogenase domain protein  33.05 
 
 
390 aa  182  1e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  31.56 
 
 
377 aa  181  1e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  30.5 
 
 
381 aa  182  1e-44  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
NC_009524  PsycPRwf_0300  acyl-CoA dehydrogenase domain-containing protein  31.32 
 
 
388 aa  182  1e-44  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
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