More than 300 homologs were found in PanDaTox collection
for query gene Afer_0952 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_0952  Holliday junction resolvase YqgF  100 
 
 
138 aa  258  2e-68  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.403393  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  43.66 
 
 
151 aa  92.4  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  41.54 
 
 
141 aa  89.7  1e-17  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  36.43 
 
 
133 aa  87.8  5e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  36.76 
 
 
141 aa  87.4  6e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  46.72 
 
 
202 aa  87  7e-17  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  42.11 
 
 
142 aa  86.3  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  40.74 
 
 
142 aa  84.3  4e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  40 
 
 
158 aa  84.3  5e-16  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  34.85 
 
 
145 aa  84.3  5e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  47.06 
 
 
137 aa  84  6e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  44.3 
 
 
153 aa  84  6e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  37.5 
 
 
146 aa  83.2  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  45.93 
 
 
173 aa  83.2  0.000000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82  0.000000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82  0.000000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  47.33 
 
 
137 aa  82.8  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  40.6 
 
 
137 aa  82.4  0.000000000000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  40.88 
 
 
138 aa  82.4  0.000000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  39.26 
 
 
139 aa  82.4  0.000000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  39.26 
 
 
139 aa  82.4  0.000000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  35.88 
 
 
141 aa  80.5  0.000000000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  42.95 
 
 
153 aa  80.9  0.000000000000006  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  45.8 
 
 
137 aa  80.5  0.000000000000007  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  39.85 
 
 
137 aa  80.1  0.000000000000009  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  38.06 
 
 
151 aa  79.7  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  45.04 
 
 
137 aa  79.7  0.00000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.52 
 
 
151 aa  79.7  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  45.99 
 
 
139 aa  79.7  0.00000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  42.03 
 
 
170 aa  79  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  35.88 
 
 
149 aa  78.6  0.00000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  38.35 
 
 
137 aa  78.6  0.00000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  36.5 
 
 
138 aa  78.6  0.00000000000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  42.54 
 
 
222 aa  78.6  0.00000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  35.92 
 
 
158 aa  78.2  0.00000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  43.88 
 
 
168 aa  77.8  0.00000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  42.54 
 
 
163 aa  77.4  0.00000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  36.84 
 
 
137 aa  77.4  0.00000000000006  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  36.03 
 
 
141 aa  77  0.00000000000007  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  37.88 
 
 
146 aa  77  0.00000000000009  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  36.03 
 
 
141 aa  76.6  0.00000000000009  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  37.04 
 
 
143 aa  76.6  0.00000000000009  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  30.3 
 
 
142 aa  76.6  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  44.44 
 
 
171 aa  76.3  0.0000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  35.66 
 
 
156 aa  76.3  0.0000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  38.81 
 
 
138 aa  76.6  0.0000000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0182311 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  44.2 
 
 
175 aa  76.6  0.0000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  37.23 
 
 
149 aa  75.9  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  36.3 
 
 
140 aa  75.5  0.0000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  38.81 
 
 
150 aa  75.9  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  33.33 
 
 
141 aa  75.9  0.0000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  33.09 
 
 
138 aa  75.1  0.0000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  39.39 
 
 
146 aa  75.1  0.0000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  40.58 
 
 
169 aa  75.1  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  40.58 
 
 
169 aa  75.1  0.0000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  36.84 
 
 
143 aa  75.5  0.0000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  40.58 
 
 
169 aa  75.1  0.0000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  41.73 
 
 
143 aa  74.3  0.0000000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  40.6 
 
 
188 aa  74.3  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  37.78 
 
 
158 aa  74.3  0.0000000000006  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  38.35 
 
 
151 aa  73.9  0.0000000000006  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  41.04 
 
 
160 aa  73.9  0.0000000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  38.24 
 
 
181 aa  73.9  0.0000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  41.98 
 
 
140 aa  73.6  0.0000000000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008783  BARBAKC583_0838  hypothetical protein  35.71 
 
 
161 aa  73.6  0.0000000000008  Bartonella bacilliformis KC583  Bacteria  normal  0.115372  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  38.1 
 
 
157 aa  73.6  0.0000000000009  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  34.85 
 
 
139 aa  72.8  0.000000000001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  30.88 
 
 
139 aa  73.2  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  40.58 
 
 
175 aa  73.2  0.000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  41.35 
 
 
163 aa  73.2  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  39.55 
 
 
163 aa  73.2  0.000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  42.25 
 
 
199 aa  73.2  0.000000000001  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  38.28 
 
 
143 aa  72  0.000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal 
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  38.28 
 
 
143 aa  72  0.000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  34.85 
 
 
139 aa  72.4  0.000000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  34.09 
 
 
142 aa  72  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  41.54 
 
 
160 aa  72.4  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0446184 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  38.35 
 
 
182 aa  72.4  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  37.32 
 
 
207 aa  72.4  0.000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  42.54 
 
 
163 aa  71.6  0.000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_011769  DvMF_2352  Holliday junction resolvase YqgF  37.4 
 
 
142 aa  71.6  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.209159 
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  42.42 
 
 
165 aa  71.6  0.000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.724014 
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  41.54 
 
 
160 aa  71.2  0.000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  42.42 
 
 
160 aa  71.2  0.000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  35.11 
 
 
137 aa  70.9  0.000000000005  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  42.42 
 
 
165 aa  71.2  0.000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal 
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  37.04 
 
 
141 aa  70.9  0.000000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  40.77 
 
 
163 aa  71.2  0.000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  39.44 
 
 
169 aa  70.9  0.000000000005  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  38.35 
 
 
145 aa  70.9  0.000000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.0863234 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  33.83 
 
 
141 aa  70.9  0.000000000006  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  32.58 
 
 
139 aa  70.9  0.000000000006  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  37.5 
 
 
161 aa  70.5  0.000000000007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  33.58 
 
 
139 aa  70.5  0.000000000008  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>