Gene Afer_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0952 
Symbol 
ID8323016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp974148 
End bp974564 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content73% 
IMG OID644952080 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_003109564 
Protein GI256371740 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.403393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGG GGTTCGGCGG CCGCGCTCTC GGCGTGGACC TTGGGACGAA GCGCATCGGC 
GTTGCGGTTG CAGAGGGCTC GCTCGCGCTG CCGCTCGAGG TCATCGACGC GCGGGGGCCG 
TGGCGTGCGA GGCTCGCCGA GCTGGTCGCG TCGGTCGGTG CGAGCGTCGT GGTCGTCGGT 
CTTCCGATCG GCCTCGATGG ATCGGAGGGT CGGGCGGCCG CCCGGGTGCG CCAGTGGTCG 
GAAGGCCTCG CGGAGCACCT CGAGGTTCCG GTCGTGTTCG TCGACGAGCG CTTGTCGTCG 
CAGGCCGCCG AGCGTCGTCT CGGGGCCGCC GGTGTCGACG CCAGGTCGCG GCGCGGTGCG 
GTGGACGCCT TTGCCGCGAC CGAGATCCTC GAGCGGTGGC TGGTGACGCA GCGGTGA
 
Protein sequence
MSEGFGGRAL GVDLGTKRIG VAVAEGSLAL PLEVIDARGP WRARLAELVA SVGASVVVVG 
LPIGLDGSEG RAAARVRQWS EGLAEHLEVP VVFVDERLSS QAAERRLGAA GVDARSRRGA 
VDAFAATEIL ERWLVTQR