More than 300 homologs were found in PanDaTox collection
for query gene Sked_27700 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  100 
 
 
321 aa  640    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  49.32 
 
 
313 aa  296  4e-79  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  45.74 
 
 
315 aa  288  8e-77  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  47.8 
 
 
316 aa  288  8e-77  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  48.85 
 
 
305 aa  288  9e-77  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  47.65 
 
 
309 aa  280  3e-74  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  46.6 
 
 
316 aa  278  8e-74  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  49.1 
 
 
283 aa  265  5.999999999999999e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  50.34 
 
 
306 aa  265  1e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  50.52 
 
 
317 aa  264  2e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  46.2 
 
 
317 aa  261  1e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  46.62 
 
 
316 aa  258  8e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  45.67 
 
 
307 aa  253  3e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  47.51 
 
 
309 aa  252  5.000000000000001e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  41.27 
 
 
321 aa  251  1e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  44.11 
 
 
317 aa  250  2e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  46.76 
 
 
300 aa  249  5e-65  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
305 aa  248  1e-64  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  43.2 
 
 
298 aa  247  2e-64  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  45.88 
 
 
305 aa  245  6e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  44.1 
 
 
292 aa  244  9.999999999999999e-64  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
335 aa  241  7.999999999999999e-63  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
335 aa  241  1e-62  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  42.5 
 
 
318 aa  240  2e-62  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
314 aa  239  4e-62  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  39.55 
 
 
322 aa  239  5e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  39.94 
 
 
324 aa  238  1e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  41.07 
 
 
305 aa  238  1e-61  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  42.37 
 
 
319 aa  236  3e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
319 aa  235  6e-61  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  45.02 
 
 
319 aa  235  6e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
293 aa  235  6e-61  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
285 aa  235  6e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  43.26 
 
 
319 aa  236  6e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  43.46 
 
 
313 aa  235  8e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  43.6 
 
 
318 aa  234  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  42.21 
 
 
331 aa  233  3e-60  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  40 
 
 
314 aa  233  4.0000000000000004e-60  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  39.2 
 
 
317 aa  231  1e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
314 aa  230  2e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
296 aa  229  4e-59  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  42.58 
 
 
323 aa  229  4e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  42.95 
 
 
307 aa  229  4e-59  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
308 aa  229  6e-59  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
296 aa  228  8e-59  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
314 aa  228  8e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
293 aa  228  9e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  39.78 
 
 
296 aa  228  1e-58  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
296 aa  227  2e-58  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  38.56 
 
 
317 aa  227  2e-58  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
296 aa  226  3e-58  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  38.8 
 
 
302 aa  226  3e-58  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  38.93 
 
 
296 aa  226  4e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
296 aa  226  4e-58  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  40.5 
 
 
292 aa  226  5.0000000000000005e-58  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
314 aa  225  8e-58  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
305 aa  225  9e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
308 aa  225  9e-58  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  36.14 
 
 
321 aa  224  1e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
317 aa  224  2e-57  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  42.67 
 
 
319 aa  223  2e-57  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  38.57 
 
 
296 aa  223  3e-57  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
319 aa  223  4e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
320 aa  222  6e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  41.69 
 
 
324 aa  221  9.999999999999999e-57  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  41.02 
 
 
320 aa  221  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  41.9 
 
 
318 aa  219  6e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
318 aa  218  7e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  40.76 
 
 
317 aa  216  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
308 aa  214  9.999999999999999e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  43.1 
 
 
315 aa  213  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  41.24 
 
 
309 aa  213  3.9999999999999995e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  41.88 
 
 
300 aa  213  4.9999999999999996e-54  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  41.09 
 
 
334 aa  211  1e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  38.65 
 
 
294 aa  211  1e-53  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5821  sugar ABC transporter, permease protein  39.32 
 
 
315 aa  209  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.286987  normal  0.812253 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  40.34 
 
 
292 aa  207  2e-52  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  38 
 
 
302 aa  206  4e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_1687  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
333 aa  205  9e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  38.06 
 
 
321 aa  204  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
308 aa  203  4e-51  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  39.66 
 
 
300 aa  202  6e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
309 aa  202  9e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
316 aa  201  9.999999999999999e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
318 aa  201  1.9999999999999998e-50  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
306 aa  201  1.9999999999999998e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
316 aa  199  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
299 aa  199  6e-50  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  40.75 
 
 
291 aa  198  1.0000000000000001e-49  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  39.18 
 
 
320 aa  196  4.0000000000000005e-49  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
313 aa  196  4.0000000000000005e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
319 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_013525  Tter_0184  binding-protein-dependent transport systems inner membrane component  41.24 
 
 
330 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
309 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
295 aa  193  3e-48  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  37.59 
 
 
312 aa  192  6e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  39.74 
 
 
306 aa  192  7e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.42 
 
 
307 aa  192  9e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.42 
 
 
307 aa  192  9e-48  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
318 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
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