More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_0905 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_0905  HAD family hydrolase  100 
 
 
204 aa  395  1e-109  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  54.05 
 
 
213 aa  182  3e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_39300  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  48.26 
 
 
218 aa  181  8.000000000000001e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3972  HAD family hydrolase  50.75 
 
 
241 aa  180  1e-44  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1853  HAD family hydrolase  54.14 
 
 
235 aa  172  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  0.147437  normal  0.0157174 
 
 
-
 
NC_009953  Sare_4356  HAD family hydrolase  46.27 
 
 
233 aa  167  1e-40  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.582602 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  45.71 
 
 
227 aa  164  6.9999999999999995e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  44.67 
 
 
238 aa  156  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4073  HAD-superfamily hydrolase subfamily IA, variant 3  44.32 
 
 
219 aa  147  1.0000000000000001e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.358464  normal 
 
 
-
 
NC_008786  Veis_2048  HAD family hydrolase  35.78 
 
 
238 aa  127  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.539587  normal  0.409572 
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  39.55 
 
 
243 aa  112  4.0000000000000004e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  38.98 
 
 
224 aa  110  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  37.93 
 
 
271 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  36.79 
 
 
222 aa  108  5e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  35.6 
 
 
249 aa  105  5e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  33.15 
 
 
218 aa  103  2e-21  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  40.22 
 
 
227 aa  102  4e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  34.52 
 
 
235 aa  102  4e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  39.11 
 
 
220 aa  102  5e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2790  HAD family hydrolase  32.18 
 
 
223 aa  102  5e-21  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2125  2-deoxyglucose-6-phosphatase  34.95 
 
 
221 aa  101  8e-21  Serratia proteamaculans 568  Bacteria  normal  0.0177126  hitchhiker  0.00144451 
 
 
-
 
NC_009436  Ent638_1717  2-deoxyglucose-6-phosphatase  35.41 
 
 
223 aa  100  1e-20  Enterobacter sp. 638  Bacteria  normal  normal  0.886251 
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  37.76 
 
 
263 aa  99.4  3e-20  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  33.33 
 
 
227 aa  99.4  3e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1912  2-deoxyglucose-6-phosphatase  35.91 
 
 
223 aa  99  4e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0120822  n/a   
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  35.91 
 
 
221 aa  98.2  7e-20  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  33.67 
 
 
213 aa  98.2  7e-20  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2205  2-deoxyglucose-6-phosphatase  36.11 
 
 
221 aa  96.7  2e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.100097  n/a   
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  46.34 
 
 
217 aa  96.7  2e-19  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_011094  SeSA_A1419  2-deoxyglucose-6-phosphatase  37.57 
 
 
222 aa  95.9  3e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.744627  hitchhiker  0.00259415 
 
 
-
 
NC_011676  PHATRDRAFT_35659  predicted protein  37.36 
 
 
267 aa  96.3  3e-19  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  31.47 
 
 
229 aa  96.3  3e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1849  2-deoxyglucose-6-phosphatase  37.57 
 
 
222 aa  95.5  4e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0029739  n/a   
 
 
-
 
NC_011205  SeD_A2022  2-deoxyglucose-6-phosphatase  37.57 
 
 
222 aa  95.5  4e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1451  2-deoxyglucose-6-phosphatase  37.57 
 
 
222 aa  95.5  4e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.913842  normal 
 
 
-
 
NC_011080  SNSL254_A1436  2-deoxyglucose-6-phosphatase  37.57 
 
 
222 aa  95.5  4e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.905236  normal 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  36.14 
 
 
218 aa  95.9  4e-19  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  34.86 
 
 
218 aa  95.1  7e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  32.22 
 
 
223 aa  93.2  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_009801  EcE24377A_1947  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92.4  4e-18  Escherichia coli E24377A  Bacteria  normal  0.504113  n/a   
 
 
-
 
NC_010658  SbBS512_E1972  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92.4  4e-18  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1464  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92.4  4e-18  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2445  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92.4  4e-18  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01696  predicted hydrolase  37.85 
 
 
222 aa  92  5e-18  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1915  HAD-superfamily hydrolase, subfamily IA, variant 3  37.85 
 
 
222 aa  92  5e-18  Escherichia coli DH1  Bacteria  normal  0.752357  n/a   
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  37.78 
 
 
456 aa  92  5e-18  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01684  hypothetical protein  37.85 
 
 
222 aa  92  5e-18  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1808  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92  5e-18  Escherichia coli HS  Bacteria  normal  0.305682  n/a   
 
 
-
 
NC_010468  EcolC_1905  2-deoxyglucose-6-phosphatase  37.85 
 
 
222 aa  92  5e-18  Escherichia coli ATCC 8739  Bacteria  normal  0.798501  normal  0.727123 
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  40.44 
 
 
456 aa  91.7  6e-18  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  37.16 
 
 
217 aa  91.3  8e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_007519  Dde_2523  HAD family hydrolase  32.5 
 
 
219 aa  90.9  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000000000119514  n/a   
 
 
-
 
NC_007925  RPC_4133  HAD family hydrolase  34.01 
 
 
223 aa  90.9  1e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  32.84 
 
 
232 aa  90.1  2e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0139  HAD-superfamily hydrolase, subfamily IA, variant 3  35.03 
 
 
220 aa  90.1  2e-17  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000437323  n/a   
 
 
-
 
NC_009831  Ssed_0437  2-deoxyglucose-6-phosphatase  30.06 
 
 
221 aa  89.4  3e-17  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000647119  hitchhiker  0.00000756317 
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  36.61 
 
 
241 aa  89.7  3e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  31.03 
 
 
221 aa  89.7  3e-17  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  32 
 
 
218 aa  89.7  3e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  31.86 
 
 
226 aa  89.7  3e-17  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_008262  CPR_0260  haloacid dehalogenase, IA family protein  29.12 
 
 
217 aa  89  4e-17  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1725  HAD family hydrolase  37.87 
 
 
228 aa  88.6  5e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  35.56 
 
 
456 aa  88.6  6e-17  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_007493  RSP_0089  hypothetical protein  37.87 
 
 
228 aa  88.6  6e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.16166  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  35.53 
 
 
247 aa  88.2  7e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  36 
 
 
213 aa  88.2  7e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_009380  Strop_2232  HAD family hydrolase  39.74 
 
 
233 aa  88.2  8e-17  Salinispora tropica CNB-440  Bacteria  normal  0.470588  normal 
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  36.47 
 
 
228 aa  87.8  9e-17  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  36.47 
 
 
228 aa  87.8  9e-17  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  36.47 
 
 
228 aa  87.8  9e-17  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  29.38 
 
 
221 aa  87.4  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  37.84 
 
 
214 aa  87.4  1e-16  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  35.2 
 
 
230 aa  87.4  1e-16  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  29.07 
 
 
223 aa  87.4  1e-16  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_006369  lpl1096  hypothetical protein  31.07 
 
 
222 aa  86.7  2e-16  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1824  HAD family hydrolase  37.82 
 
 
222 aa  86.7  2e-16  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  35.47 
 
 
242 aa  86.7  2e-16  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_011661  Dtur_0461  HAD-superfamily hydrolase, subfamily IA, variant 3  33.01 
 
 
217 aa  86.7  2e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3772  2-deoxyglucose-6-phosphatase  30.51 
 
 
218 aa  85.9  3e-16  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1697  2-deoxyglucose-6-phosphatase  32.02 
 
 
221 aa  85.9  4e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  37.69 
 
 
216 aa  85.9  4e-16  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
NC_010465  YPK_1808  2-deoxyglucose-6-phosphatase  32.02 
 
 
221 aa  85.9  4e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.417032  n/a   
 
 
-
 
NC_008261  CPF_0269  haloacid dehalogenase, IA family protein  28.57 
 
 
217 aa  85.9  4e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2349  HAD family hydrolase  39.1 
 
 
215 aa  85.5  5e-16  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.355354 
 
 
-
 
NC_006368  lpp1093  hypothetical protein  30.58 
 
 
222 aa  85.5  5e-16  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  31.46 
 
 
220 aa  85.5  5e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
233 aa  85.1  7e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0271  hypothetical protein  37.34 
 
 
229 aa  84.7  9e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_007514  Cag_0071  Beta-phosphoglucomutase hydrolase  31.47 
 
 
234 aa  84  0.000000000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0284  2-deoxyglucose-6-phosphatase  29.94 
 
 
221 aa  84.3  0.000000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00458991 
 
 
-
 
NC_010571  Oter_1593  beta-phosphoglucomutase family hydrolase  38.94 
 
 
202 aa  84.3  0.000000000000001  Opitutus terrae PB90-1  Bacteria  normal  normal  0.113259 
 
 
-
 
NC_007347  Reut_A0142  HAD family hydrolase  36.08 
 
 
235 aa  83.6  0.000000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  30.06 
 
 
217 aa  83.6  0.000000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_009428  Rsph17025_1679  HAD family hydrolase  39.72 
 
 
228 aa  83.6  0.000000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.329871  normal 
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  31.25 
 
 
218 aa  83.2  0.000000000000002  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  40.54 
 
 
222 aa  83.6  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_008345  Sfri_1899  HAD family hydrolase  38.98 
 
 
233 aa  83.2  0.000000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.629061  n/a   
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  38.52 
 
 
232 aa  82.8  0.000000000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  31.82 
 
 
217 aa  82.4  0.000000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_5789  HAD-superfamily hydrolase subfamily IA, variant 3  33.83 
 
 
248 aa  82.8  0.000000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.805096 
 
 
-
 
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