More than 300 homologs were found in PanDaTox collection
for query gene RPB_1689 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  94.2 
 
 
414 aa  805    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  81.64 
 
 
415 aa  713    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  100 
 
 
415 aa  853    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  78.26 
 
 
413 aa  684    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  93 
 
 
414 aa  800    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  81.16 
 
 
415 aa  713    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  81.64 
 
 
415 aa  715    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  78.99 
 
 
414 aa  687    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  86.71 
 
 
415 aa  748    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  61.26 
 
 
432 aa  539  9.999999999999999e-153  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  54.74 
 
 
407 aa  469  1.0000000000000001e-131  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  54.74 
 
 
409 aa  453  1.0000000000000001e-126  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  50.36 
 
 
411 aa  417  9.999999999999999e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  47.22 
 
 
403 aa  363  2e-99  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  45.43 
 
 
407 aa  338  9.999999999999999e-92  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  45.23 
 
 
401 aa  325  1e-87  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  43.23 
 
 
403 aa  323  4e-87  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  45.26 
 
 
384 aa  304  1.0000000000000001e-81  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  40.91 
 
 
378 aa  290  2e-77  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  40.25 
 
 
393 aa  288  1e-76  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  44.63 
 
 
396 aa  286  5.999999999999999e-76  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  47.48 
 
 
396 aa  284  2.0000000000000002e-75  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  39.24 
 
 
380 aa  284  2.0000000000000002e-75  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  43.8 
 
 
394 aa  284  2.0000000000000002e-75  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  47.48 
 
 
396 aa  284  2.0000000000000002e-75  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
398 aa  278  1e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  38.29 
 
 
393 aa  275  1.0000000000000001e-72  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  43.13 
 
 
395 aa  274  2.0000000000000002e-72  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
390 aa  273  3e-72  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  46.71 
 
 
396 aa  272  7e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  38.81 
 
 
385 aa  270  5e-71  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  38.46 
 
 
400 aa  269  5.9999999999999995e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
378 aa  269  7e-71  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  37.98 
 
 
370 aa  266  5.999999999999999e-70  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
390 aa  266  7e-70  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  44.44 
 
 
398 aa  266  7e-70  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  44.55 
 
 
397 aa  262  6.999999999999999e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  38.19 
 
 
383 aa  259  5.0000000000000005e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  36.98 
 
 
381 aa  259  8e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  36.59 
 
 
383 aa  258  1e-67  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  40.5 
 
 
411 aa  257  3e-67  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  37.65 
 
 
413 aa  256  7e-67  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  36.2 
 
 
392 aa  252  1e-65  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  37.53 
 
 
363 aa  251  2e-65  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
462 aa  250  3e-65  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  34.65 
 
 
396 aa  250  4e-65  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  40.98 
 
 
403 aa  249  9e-65  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  41.07 
 
 
396 aa  248  1e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  36.39 
 
 
394 aa  244  1.9999999999999999e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  36.59 
 
 
397 aa  244  1.9999999999999999e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  35.87 
 
 
397 aa  243  3e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
396 aa  243  3.9999999999999997e-63  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  35.48 
 
 
378 aa  243  5e-63  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  38.63 
 
 
395 aa  241  2e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  36.52 
 
 
386 aa  239  5e-62  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  34.42 
 
 
419 aa  239  5e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.21 
 
 
399 aa  238  2e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  34.56 
 
 
400 aa  237  3e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  34.48 
 
 
416 aa  236  6e-61  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
393 aa  236  6e-61  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_010333  Caul_5300  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
402 aa  236  8e-61  Caulobacter sp. K31  Bacteria  normal  normal  0.712748 
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  37.03 
 
 
382 aa  236  8e-61  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  33.84 
 
 
382 aa  235  1.0000000000000001e-60  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
386 aa  234  2.0000000000000002e-60  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_009511  Swit_3628  acyl-CoA dehydrogenase domain-containing protein  34.31 
 
 
383 aa  233  4.0000000000000004e-60  Sphingomonas wittichii RW1  Bacteria  normal  0.373351  normal  0.221875 
 
 
-
 
NC_009921  Franean1_3589  acyl-CoA dehydrogenase domain-containing protein  34 
 
 
404 aa  233  5e-60  Frankia sp. EAN1pec  Bacteria  normal  normal  0.646816 
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  33.5 
 
 
389 aa  233  6e-60  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  37.57 
 
 
734 aa  233  7.000000000000001e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  37.78 
 
 
402 aa  233  7.000000000000001e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  35.95 
 
 
385 aa  232  8.000000000000001e-60  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_009077  Mjls_0355  acyl-CoA dehydrogenase domain-containing protein  41.45 
 
 
730 aa  232  8.000000000000001e-60  Mycobacterium sp. JLS  Bacteria  normal  0.353074  normal 
 
 
-
 
NC_008146  Mmcs_0366  acyl-CoA dehydrogenase-like protein  41.45 
 
 
730 aa  232  8.000000000000001e-60  Mycobacterium sp. MCS  Bacteria  normal  0.235849  n/a   
 
 
-
 
NC_008705  Mkms_0376  acyl-CoA dehydrogenase domain-containing protein  41.45 
 
 
730 aa  232  8.000000000000001e-60  Mycobacterium sp. KMS  Bacteria  normal  0.262889  normal 
 
 
-
 
NC_009921  Franean1_4581  acyl-CoA dehydrogenase domain-containing protein  34.07 
 
 
394 aa  231  1e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.676846 
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  40.41 
 
 
737 aa  231  1e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  37.44 
 
 
381 aa  231  2e-59  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  34.88 
 
 
398 aa  230  3e-59  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3995  acyl-CoA dehydrogenase domain protein  33.82 
 
 
419 aa  231  3e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  0.30356  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  33.25 
 
 
402 aa  229  5e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
452 aa  229  5e-59  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009338  Mflv_0335  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
728 aa  229  5e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  33.41 
 
 
400 aa  229  6e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  34.92 
 
 
388 aa  229  7e-59  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2719  acyl-CoA dehydrogenase domain-containing protein  32.24 
 
 
429 aa  229  7e-59  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  35.35 
 
 
374 aa  229  7e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_008146  Mmcs_4693  acyl-CoA dehydrogenase-like protein  35.38 
 
 
384 aa  228  1e-58  Mycobacterium sp. MCS  Bacteria  normal  0.311916  n/a   
 
 
-
 
NC_009077  Mjls_5078  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
384 aa  228  1e-58  Mycobacterium sp. JLS  Bacteria  normal  normal  0.292219 
 
 
-
 
NC_008705  Mkms_4779  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
384 aa  228  1e-58  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  34.23 
 
 
398 aa  228  2e-58  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_010338  Caul_1447  acyl-CoA dehydrogenase domain-containing protein  35.61 
 
 
401 aa  228  2e-58  Caulobacter sp. K31  Bacteria  normal  normal  0.0993289 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  34.47 
 
 
398 aa  228  2e-58  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1625  acyl-CoA dehydrogenase domain-containing protein  34.65 
 
 
422 aa  228  2e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10275  acyl-CoA dehydrogenase fadE6  38.94 
 
 
731 aa  227  3e-58  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0482205 
 
 
-
 
NC_013510  Tcur_0956  acyl-CoA dehydrogenase domain protein  38.53 
 
 
408 aa  227  4e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  33.91 
 
 
397 aa  226  5.0000000000000005e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  34.41 
 
 
392 aa  226  5.0000000000000005e-58  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_009338  Mflv_2334  acyl-CoA dehydrogenase domain-containing protein  39.12 
 
 
400 aa  226  8e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.615469 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
398 aa  225  9e-58  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2769  acyl-CoA dehydrogenase domain-containing protein  33.66 
 
 
393 aa  225  9e-58  Nocardioides sp. JS614  Bacteria  normal  0.153343  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  33.25 
 
 
396 aa  225  1e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
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