Gene Mvan_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0394 
Symbol 
ID4645872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp425877 
End bp427073 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID639803902 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_951248 
Protein GI120401419 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.254856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.326104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTG ATGCCGACCG GGTTGCCGAC GCCGCCCGCC GGGTGGTCGA CGAACACGAC 
CCCAAGACCG TCCCGATTCC CGAATTCCTC GGCGCCTGCT TCGACGCGGG ACTGTCGTGG
GTGCACTTCC CCGAAGGCTT CGGTGGCCTC GGCCTGTCCC GCGGACTGCA GGCGGTTGCG
GATCGCATCC TGCAGGGCGC CGGCGGTCCG GTCCCACTGG GGCTGAACCC GATGGGGTAC
GGCATGGCCG CCCCGACGGT GCGGGAGCAC GCCCAGACCG ACGAAGTCCG CCATCGGCTG
CTGCGGCCGC TGGCGACCAC CGAGGAGATC TGGTGCCAGC TGTTCTCCGA ACCCGGCGCC
GGATCGGATC TCGCAGGGCT GGCCACGTCG GCCGTCCTCG ACGGTGACAC CTGGGTCGTC
AACGGCCAGA AGGTGTGGAC CAGCCTCGCC CACCGCGCCA AGTGGGGGCT GCTGCTGGCG
CGCACCGACC CCGACGTCCC CAAACACAAG GGCCTCACGT ACTTCGTCAT CGACATGCAC
GCCGACGGCG TGCAGACCCG CCCGCTGCGG CAGCTCACCG GGCACGCGGA GTTCAACGAG
GTCTACATGA CCGATGCCCG CATCCCCGAC GCCTACCGGC TCGGCGCGGT CGGCGACGGC
TGGCGGGTCG CGATGACCAC GCTGATGAAC GAGCGCAGCG CGCTCGGGGG CAGCGGCAGC
AGGCGCGGGG CGGGCACCGT CTCGGACGCG GTCGCGCTGT GGGCGTCGCG CCCGGACCTG
CACACCCCGG TGTTGCGCGA CCGGCTGACC AGGCTGTGGC TCCGGGCCGA GGCGCAGCGG
CTCACCTCCG AGCGGTCCAG GGCGTCGGCG ACCGTCGGCG GACCCGGCCC GGAGGGTTCG
GTCGGCAAGC TCGTCGGAGC CGAGCTCAAC CAGCACATCT ACGAGTTCTG CATGGATCTG
CTCGGTCCCG AAGGGATTCT GTACGGCAGC TACGGAATGC AGGACACTTC CTCGAATGGC
GACGCCCAGG ACTGGCGCGG ACCGATCCAG CAGCGGTTCC TGCGCAGCCG CGCCAACACG
ATCGAGGGCG GAACGTCCGA GGTGATGCGC AACATTCTCG CCGAGCGGGT GCTCGGCCTG
CCGGGAGACC TCCGCGCGGA TGCGGGGATG CCGTGGAAGG AGGTGCCGCG TGGCTGA
 
Protein sequence
MGTDADRVAD AARRVVDEHD PKTVPIPEFL GACFDAGLSW VHFPEGFGGL GLSRGLQAVA 
DRILQGAGGP VPLGLNPMGY GMAAPTVREH AQTDEVRHRL LRPLATTEEI WCQLFSEPGA
GSDLAGLATS AVLDGDTWVV NGQKVWTSLA HRAKWGLLLA RTDPDVPKHK GLTYFVIDMH
ADGVQTRPLR QLTGHAEFNE VYMTDARIPD AYRLGAVGDG WRVAMTTLMN ERSALGGSGS
RRGAGTVSDA VALWASRPDL HTPVLRDRLT RLWLRAEAQR LTSERSRASA TVGGPGPEGS
VGKLVGAELN QHIYEFCMDL LGPEGILYGS YGMQDTSSNG DAQDWRGPIQ QRFLRSRANT
IEGGTSEVMR NILAERVLGL PGDLRADAGM PWKEVPRG