Gene Sala_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1636 
Symbol 
ID4080714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1717877 
End bp1719082 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content66% 
IMG OID638010009 
Productacyl-CoA dehydrogenase-like protein 
Protein accessionYP_616682 
Protein GI103487121 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.552524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCGAAGCCTA TCGGCGCAAG GCGCGCAGCT GGCTCGAGTC CGTGGCGCCG 
CGCTATGGAC GGGCGGCGCG CGCGGGGTTG AGCGAAGAAG AGGATCTGGC GCTCGGGCGG
GCTTATCTCA GGGAACGCCA TGCGGCGGGC TATGCCGGGA TCAACTGGCC GACTGAGTAT
GGCGGTCAGG GACTCGGCCA TATCGAAAAG GTCGCCTTCG ACACCGAAGA GATGCCGTTC
GGCATGCCGA CCGCCTATTT CAGCATCTCG CTCGGCATGC CGGTCCCCGT CCTCATGCGC
TTTTGCGAAG ACAGGCAATG GGTGCGCGAG CGCGTGCTCA AGGCGCTCAC CGGCGAGGAA
ATCTGGTGCC AGCTTTTTTC GGAACCGGCG GCGGGGTCGG ACCTCGCCGG GCTGCGCACG
CGGGCCGAGC CTGACGGCAA CGGCTGGAAG ATCAACGGGC AGAAGGTCTG GACGAGCTGG
GCGCAATATA GTGACTATGG CGTCATCGTC GTGCGCACCG ACCCGACGGT GCCCAAGCAC
AAGGGGCTCA CATACTTCTG GGTCGATATG AAGGCGCCGG GCGTCACCGT GCGCCCGATC
AAGCTCGCGG GCGGCGACAG CCATGTCAAC GAGGTGTTCT TCGACGATGT GAAGGTCGGC
GACGATCATC GCATGTCGCC GGTCGGCGGC GGCTTTGCGG TCGCGATGGC GACGCTGATG
ATCGAACGCT ATGTCGCGAC CGACAGCGCG GGCTTCGGTC CGCACCTCGA CCTGTTCGTC
GATCTGGCGA AAGAGATGAA GCTGAACGGC CGCCCCGCGA TCGAGGACGG CCGCATCCGC
CAGCAGATCG CGCGCAACTA TGCGATGCGG AGCGCGCTCG ATGCCATCAC CACCCGCGCG
ATGCGGATGA TGCAGGCGGG CATGGAACCC GGCCCCGAAG GCTCGCTCAA CAAGCTCGTG
TCGGTGCGTT CGCGCCAGAA GCTGTCCGAA CTCGCGCTCG ACCTGCAGGG CACTGCGGGT
CTCGCCTTCG ATGCGCACGC CCCGGTCAAG CAGGACTGGG GCGTGAGCTG GATCAACGCG
CCGACGGGTC GCATCGCGGG CGGCGCCGAC GAAATGCTGC TCAACACGAT TGCCGAAAAG
ATCCTCGGAC TTCCGCAGGA TTACCGCCCC GACAAGGGCG TCCCGTTCAA CCAGATTCCC
GCCTGA
 
Protein sequence
MTDIEAYRRK ARSWLESVAP RYGRAARAGL SEEEDLALGR AYLRERHAAG YAGINWPTEY 
GGQGLGHIEK VAFDTEEMPF GMPTAYFSIS LGMPVPVLMR FCEDRQWVRE RVLKALTGEE
IWCQLFSEPA AGSDLAGLRT RAEPDGNGWK INGQKVWTSW AQYSDYGVIV VRTDPTVPKH
KGLTYFWVDM KAPGVTVRPI KLAGGDSHVN EVFFDDVKVG DDHRMSPVGG GFAVAMATLM
IERYVATDSA GFGPHLDLFV DLAKEMKLNG RPAIEDGRIR QQIARNYAMR SALDAITTRA
MRMMQAGMEP GPEGSLNKLV SVRSRQKLSE LALDLQGTAG LAFDAHAPVK QDWGVSWINA
PTGRIAGGAD EMLLNTIAEK ILGLPQDYRP DKGVPFNQIP A