Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1636 |
Symbol | |
ID | 4080714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1717877 |
End bp | 1719082 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010009 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_616682 |
Protein GI | 103487121 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.552524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACA TCGAAGCCTA TCGGCGCAAG GCGCGCAGCT GGCTCGAGTC CGTGGCGCCG CGCTATGGAC GGGCGGCGCG CGCGGGGTTG AGCGAAGAAG AGGATCTGGC GCTCGGGCGG GCTTATCTCA GGGAACGCCA TGCGGCGGGC TATGCCGGGA TCAACTGGCC GACTGAGTAT GGCGGTCAGG GACTCGGCCA TATCGAAAAG GTCGCCTTCG ACACCGAAGA GATGCCGTTC GGCATGCCGA CCGCCTATTT CAGCATCTCG CTCGGCATGC CGGTCCCCGT CCTCATGCGC TTTTGCGAAG ACAGGCAATG GGTGCGCGAG CGCGTGCTCA AGGCGCTCAC CGGCGAGGAA ATCTGGTGCC AGCTTTTTTC GGAACCGGCG GCGGGGTCGG ACCTCGCCGG GCTGCGCACG CGGGCCGAGC CTGACGGCAA CGGCTGGAAG ATCAACGGGC AGAAGGTCTG GACGAGCTGG GCGCAATATA GTGACTATGG CGTCATCGTC GTGCGCACCG ACCCGACGGT GCCCAAGCAC AAGGGGCTCA CATACTTCTG GGTCGATATG AAGGCGCCGG GCGTCACCGT GCGCCCGATC AAGCTCGCGG GCGGCGACAG CCATGTCAAC GAGGTGTTCT TCGACGATGT GAAGGTCGGC GACGATCATC GCATGTCGCC GGTCGGCGGC GGCTTTGCGG TCGCGATGGC GACGCTGATG ATCGAACGCT ATGTCGCGAC CGACAGCGCG GGCTTCGGTC CGCACCTCGA CCTGTTCGTC GATCTGGCGA AAGAGATGAA GCTGAACGGC CGCCCCGCGA TCGAGGACGG CCGCATCCGC CAGCAGATCG CGCGCAACTA TGCGATGCGG AGCGCGCTCG ATGCCATCAC CACCCGCGCG ATGCGGATGA TGCAGGCGGG CATGGAACCC GGCCCCGAAG GCTCGCTCAA CAAGCTCGTG TCGGTGCGTT CGCGCCAGAA GCTGTCCGAA CTCGCGCTCG ACCTGCAGGG CACTGCGGGT CTCGCCTTCG ATGCGCACGC CCCGGTCAAG CAGGACTGGG GCGTGAGCTG GATCAACGCG CCGACGGGTC GCATCGCGGG CGGCGCCGAC GAAATGCTGC TCAACACGAT TGCCGAAAAG ATCCTCGGAC TTCCGCAGGA TTACCGCCCC GACAAGGGCG TCCCGTTCAA CCAGATTCCC GCCTGA
|
Protein sequence | MTDIEAYRRK ARSWLESVAP RYGRAARAGL SEEEDLALGR AYLRERHAAG YAGINWPTEY GGQGLGHIEK VAFDTEEMPF GMPTAYFSIS LGMPVPVLMR FCEDRQWVRE RVLKALTGEE IWCQLFSEPA AGSDLAGLRT RAEPDGNGWK INGQKVWTSW AQYSDYGVIV VRTDPTVPKH KGLTYFWVDM KAPGVTVRPI KLAGGDSHVN EVFFDDVKVG DDHRMSPVGG GFAVAMATLM IERYVATDSA GFGPHLDLFV DLAKEMKLNG RPAIEDGRIR QQIARNYAMR SALDAITTRA MRMMQAGMEP GPEGSLNKLV SVRSRQKLSE LALDLQGTAG LAFDAHAPVK QDWGVSWINA PTGRIAGGAD EMLLNTIAEK ILGLPQDYRP DKGVPFNQIP A
|
| |