More than 300 homologs were found in PanDaTox collection
for query gene Swit_3397 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
403 aa  804    Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  51.21 
 
 
413 aa  412  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  49.39 
 
 
414 aa  400  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  50 
 
 
415 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  48.43 
 
 
415 aa  397  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  48.2 
 
 
415 aa  392  1e-108  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  48.28 
 
 
414 aa  391  1e-107  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  50.61 
 
 
409 aa  390  1e-107  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  47.46 
 
 
415 aa  385  1e-105  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  47.36 
 
 
415 aa  380  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  47.3 
 
 
414 aa  375  1e-103  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  47.68 
 
 
432 aa  373  1e-102  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  48.17 
 
 
407 aa  374  1e-102  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  47.43 
 
 
411 aa  336  2.9999999999999997e-91  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  43.11 
 
 
401 aa  311  2e-83  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  44.01 
 
 
407 aa  306  3e-82  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  44.69 
 
 
384 aa  306  4.0000000000000004e-82  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  43.21 
 
 
403 aa  303  5.000000000000001e-81  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  44.6 
 
 
397 aa  279  5e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  41.1 
 
 
393 aa  276  4e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  45.71 
 
 
395 aa  275  8e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  45.28 
 
 
411 aa  275  1.0000000000000001e-72  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  41.6 
 
 
378 aa  272  7e-72  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  44.01 
 
 
390 aa  270  2.9999999999999997e-71  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  44.81 
 
 
396 aa  266  4e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  43.44 
 
 
395 aa  266  5e-70  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  44.75 
 
 
403 aa  263  6e-69  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  46.2 
 
 
396 aa  262  8.999999999999999e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  39.49 
 
 
380 aa  258  1e-67  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  39.5 
 
 
390 aa  252  8.000000000000001e-66  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  41 
 
 
398 aa  252  9.000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  39.38 
 
 
378 aa  251  1e-65  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  44.25 
 
 
402 aa  248  1e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  39.17 
 
 
398 aa  242  9e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  39.83 
 
 
396 aa  241  1e-62  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
396 aa  242  1e-62  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  39.04 
 
 
393 aa  240  4e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  39.55 
 
 
396 aa  240  4e-62  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  39.56 
 
 
413 aa  240  4e-62  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  39.55 
 
 
396 aa  240  4e-62  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  39.17 
 
 
394 aa  236  5.0000000000000005e-61  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  34.59 
 
 
397 aa  233  4.0000000000000004e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  39.07 
 
 
383 aa  233  4.0000000000000004e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  37.56 
 
 
383 aa  233  5e-60  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13606  acyl-CoA dehydrogenase fadE34  40.23 
 
 
711 aa  230  4e-59  Mycobacterium tuberculosis F11  Bacteria  normal  0.65257  normal  0.531914 
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  35.82 
 
 
370 aa  229  9e-59  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_008726  Mvan_5311  acyl-CoA dehydrogenase domain-containing protein  40.54 
 
 
716 aa  229  9e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.17244 
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  37.87 
 
 
392 aa  228  1e-58  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  34.58 
 
 
396 aa  228  1e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  37.75 
 
 
394 aa  226  4e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  37.22 
 
 
462 aa  226  5.0000000000000005e-58  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_009921  Franean1_4727  acyl-CoA dehydrogenase domain-containing protein  36.95 
 
 
423 aa  226  6e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  35.78 
 
 
402 aa  226  8e-58  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  34.84 
 
 
396 aa  224  1e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  38.53 
 
 
736 aa  224  2e-57  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0956  acyl-CoA dehydrogenase domain protein  42.32 
 
 
408 aa  224  2e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  37.21 
 
 
381 aa  224  2e-57  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2336  acyl-CoA dehydrogenase domain-containing protein  37.44 
 
 
422 aa  224  3e-57  Mycobacterium sp. JLS  Bacteria  normal  0.751134  hitchhiker  0.00284944 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  33.92 
 
 
398 aa  224  3e-57  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  33.91 
 
 
398 aa  224  3e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8743  acyl-CoA dehydrogenase domain protein  37.28 
 
 
404 aa  224  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.316323 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  33.91 
 
 
398 aa  223  4e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1625  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
422 aa  223  4e-57  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  33.91 
 
 
398 aa  223  4e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008146  Mmcs_2297  acyl-CoA dehydrogenase-like protein  37.96 
 
 
422 aa  223  4e-57  Mycobacterium sp. MCS  Bacteria  decreased coverage  0.0092497  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  34.42 
 
 
385 aa  223  4e-57  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_008705  Mkms_2344  acyl-CoA dehydrogenase domain-containing protein  37.96 
 
 
422 aa  223  4e-57  Mycobacterium sp. KMS  Bacteria  normal  0.529004  normal  0.371665 
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  33.91 
 
 
398 aa  223  4e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  33.91 
 
 
398 aa  223  4e-57  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  33.91 
 
 
398 aa  223  4e-57  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  39.39 
 
 
734 aa  223  4.9999999999999996e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  35.78 
 
 
404 aa  223  6e-57  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_009921  Franean1_2719  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
429 aa  223  6e-57  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  37.75 
 
 
393 aa  223  7e-57  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  36.12 
 
 
400 aa  222  9.999999999999999e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  33.67 
 
 
398 aa  221  9.999999999999999e-57  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6713  Acyl-CoA dehydrogenase-like protein  39.88 
 
 
744 aa  222  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289113  normal  0.281332 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  33.67 
 
 
398 aa  221  9.999999999999999e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  33.67 
 
 
398 aa  221  9.999999999999999e-57  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  40.35 
 
 
737 aa  222  9.999999999999999e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  33.66 
 
 
398 aa  221  1.9999999999999999e-56  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.41 
 
 
399 aa  221  1.9999999999999999e-56  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009565  TBFG_10275  acyl-CoA dehydrogenase fadE6  39.71 
 
 
731 aa  221  1.9999999999999999e-56  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0482205 
 
 
-
 
NC_013510  Tcur_3494  acyl-CoA dehydrogenase domain protein  38.78 
 
 
739 aa  221  1.9999999999999999e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5097  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
717 aa  221  1.9999999999999999e-56  Mycobacterium sp. JLS  Bacteria  normal  normal  0.167108 
 
 
-
 
NC_008146  Mmcs_4712  acyl-CoA dehydrogenase-like protein  37.84 
 
 
717 aa  220  3e-56  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4798  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
717 aa  220  3e-56  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  34.87 
 
 
416 aa  219  5e-56  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
398 aa  219  5e-56  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  33.5 
 
 
398 aa  219  6e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  33.74 
 
 
400 aa  219  7e-56  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  36.01 
 
 
374 aa  219  7e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  34.48 
 
 
397 aa  219  8.999999999999998e-56  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_013131  Caci_1366  acyl-CoA dehydrogenase domain protein  35.64 
 
 
380 aa  219  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.696625 
 
 
-
 
NC_009921  Franean1_3589  acyl-CoA dehydrogenase domain-containing protein  36.8 
 
 
404 aa  219  8.999999999999998e-56  Frankia sp. EAN1pec  Bacteria  normal  normal  0.646816 
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  38.9 
 
 
381 aa  218  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3727  putative acyl-CoA dehydrogenase  36.48 
 
 
399 aa  218  1e-55  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
398 aa  218  1e-55  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4582  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
418 aa  218  2e-55  Frankia sp. EAN1pec  Bacteria  normal  0.770197  normal  0.671641 
 
 
-
 
NC_008146  Mmcs_0040  acyl-CoA dehydrogenase-like protein  40.12 
 
 
738 aa  217  2e-55  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
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