Gene Sala_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1246 
Symbol 
ID4080317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1296672 
End bp1297826 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content64% 
IMG OID638009606 
Productacyl-CoA dehydrogenase-like protein 
Protein accessionYP_616294 
Protein GI103486733 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.235066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCG AGTTCGGAAA GGCCGCGCGC AAGGGGCTGG GCGTCGAAGA AGATCTGGCG 
CTCGGTCGCC GCTATCAAAG GGCCAAGTTC GACGCGGGCT TTGCAGGTAT CAACTGGCCG
ACCAAATATG GCGGCCAGGG CCTCGGTCAT ATCGAAAAGA TCAGCTTCGA GGCCGAGGAG
ATGAAACACG GCTTCCCCAA CGTCTATTTC GGCATTTCGC TGGGGATGCC GGTACCTGTG
CTCATGCAGT TCGGCAGCGA CCGCGAGTTC GTGAAAGAGC GCGTGCTCAA GGCGCTCACC
GGCGAGGAAA TCTGGTGCCA GCTCTTCTCC GAACCTTCGG GCGGTACGGA CCTCGCCGGG
CTGCGCACGC GGGCCGAGCC TGACGGCAAT GGCTGGAAGA TCAACGGGCA GAAGGTCTGG
ACGAGCTGGG CGCAATATAG TGACTATGGC GTCATCGTCG TGCGCACCGA CCCGACGGTG
CCCAAGCACA AGGGGCTCAC ATACTTCTGG GTCGATATGA AGGCGCCGGG CGTCACCGTG
CGCCCGATCA AGCTCGCGGG CGGCGACAGC CATGTCAACG AGGTGTTCTT CGACGATGTG
AAGGTCGGCG ACGATCATCG CATGTCGCCG GTCGGCGGCG GCTTTGCGGT CGCGATGGCG
ACGCTGATGA TCGAACGCTA TGTCGCGACC GACAGCGCGG GCTTCGGTCC GCACCTCGAC
CTGTTCGTCG ATCTGGCGAA AGAGATGAAG CTGAACGGCC GCCCCGCGAT CGAGGATGGC
CGCATCCGCC AGCAGATCGC CCGCAACTAT GCGATGCGCG CCGGGCTCGA CTCCATCAAC
ATGCGCGCGC GACTGATGAT GCAGGCGGGC ATGACGCCCG GCCCCGAAGG CTCGCTGGGC
AAGCTCGTGT CGGTTCGTTC GCGCCAGAAA TTGTCCGAAC TCGCGCTCGA CCTGCAAGGC
TCCGAAGCCT TCGCGTTCGA CGACCACGCC TCGCCCAGGG ACGACTGGGC GTCGAGCTGG
ATCAACGCGC CGACGGGCCG TATCGCGGGC GGATCGGATG AGACTTTGCT CAACACGATT
GCCGAAAAGA TCCTCGGACT GCCGCAGGAT CACCGCCCCG ACAAGGGCAT TCCGTTCAAC
CAGATCCCCG CCTGA
 
Protein sequence
MVAEFGKAAR KGLGVEEDLA LGRRYQRAKF DAGFAGINWP TKYGGQGLGH IEKISFEAEE 
MKHGFPNVYF GISLGMPVPV LMQFGSDREF VKERVLKALT GEEIWCQLFS EPSGGTDLAG
LRTRAEPDGN GWKINGQKVW TSWAQYSDYG VIVVRTDPTV PKHKGLTYFW VDMKAPGVTV
RPIKLAGGDS HVNEVFFDDV KVGDDHRMSP VGGGFAVAMA TLMIERYVAT DSAGFGPHLD
LFVDLAKEMK LNGRPAIEDG RIRQQIARNY AMRAGLDSIN MRARLMMQAG MTPGPEGSLG
KLVSVRSRQK LSELALDLQG SEAFAFDDHA SPRDDWASSW INAPTGRIAG GSDETLLNTI
AEKILGLPQD HRPDKGIPFN QIPA