Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1246 |
Symbol | |
ID | 4080317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1296672 |
End bp | 1297826 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009606 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_616294 |
Protein GI | 103486733 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.235066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCCG AGTTCGGAAA GGCCGCGCGC AAGGGGCTGG GCGTCGAAGA AGATCTGGCG CTCGGTCGCC GCTATCAAAG GGCCAAGTTC GACGCGGGCT TTGCAGGTAT CAACTGGCCG ACCAAATATG GCGGCCAGGG CCTCGGTCAT ATCGAAAAGA TCAGCTTCGA GGCCGAGGAG ATGAAACACG GCTTCCCCAA CGTCTATTTC GGCATTTCGC TGGGGATGCC GGTACCTGTG CTCATGCAGT TCGGCAGCGA CCGCGAGTTC GTGAAAGAGC GCGTGCTCAA GGCGCTCACC GGCGAGGAAA TCTGGTGCCA GCTCTTCTCC GAACCTTCGG GCGGTACGGA CCTCGCCGGG CTGCGCACGC GGGCCGAGCC TGACGGCAAT GGCTGGAAGA TCAACGGGCA GAAGGTCTGG ACGAGCTGGG CGCAATATAG TGACTATGGC GTCATCGTCG TGCGCACCGA CCCGACGGTG CCCAAGCACA AGGGGCTCAC ATACTTCTGG GTCGATATGA AGGCGCCGGG CGTCACCGTG CGCCCGATCA AGCTCGCGGG CGGCGACAGC CATGTCAACG AGGTGTTCTT CGACGATGTG AAGGTCGGCG ACGATCATCG CATGTCGCCG GTCGGCGGCG GCTTTGCGGT CGCGATGGCG ACGCTGATGA TCGAACGCTA TGTCGCGACC GACAGCGCGG GCTTCGGTCC GCACCTCGAC CTGTTCGTCG ATCTGGCGAA AGAGATGAAG CTGAACGGCC GCCCCGCGAT CGAGGATGGC CGCATCCGCC AGCAGATCGC CCGCAACTAT GCGATGCGCG CCGGGCTCGA CTCCATCAAC ATGCGCGCGC GACTGATGAT GCAGGCGGGC ATGACGCCCG GCCCCGAAGG CTCGCTGGGC AAGCTCGTGT CGGTTCGTTC GCGCCAGAAA TTGTCCGAAC TCGCGCTCGA CCTGCAAGGC TCCGAAGCCT TCGCGTTCGA CGACCACGCC TCGCCCAGGG ACGACTGGGC GTCGAGCTGG ATCAACGCGC CGACGGGCCG TATCGCGGGC GGATCGGATG AGACTTTGCT CAACACGATT GCCGAAAAGA TCCTCGGACT GCCGCAGGAT CACCGCCCCG ACAAGGGCAT TCCGTTCAAC CAGATCCCCG CCTGA
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Protein sequence | MVAEFGKAAR KGLGVEEDLA LGRRYQRAKF DAGFAGINWP TKYGGQGLGH IEKISFEAEE MKHGFPNVYF GISLGMPVPV LMQFGSDREF VKERVLKALT GEEIWCQLFS EPSGGTDLAG LRTRAEPDGN GWKINGQKVW TSWAQYSDYG VIVVRTDPTV PKHKGLTYFW VDMKAPGVTV RPIKLAGGDS HVNEVFFDDV KVGDDHRMSP VGGGFAVAMA TLMIERYVAT DSAGFGPHLD LFVDLAKEMK LNGRPAIEDG RIRQQIARNY AMRAGLDSIN MRARLMMQAG MTPGPEGSLG KLVSVRSRQK LSELALDLQG SEAFAFDDHA SPRDDWASSW INAPTGRIAG GSDETLLNTI AEKILGLPQD HRPDKGIPFN QIPA
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