| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5188 |
|---|
| Symbol | |
|---|
| ID | 4114017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5474404 |
|---|
| End bp | 5475594 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638034346 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_642348 |
|---|
| Protein GI | 108802151 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CCGCTGATAT CGATCGGGTC ACCGAACTCG CCAACCGCGT CGTGGCCGAA
TACGATCCCA AGACCGTGCT GATCCCCGAG TACCTCGGCG CCTGTTACGA CGCCGGCCTG
TCGTGGGTGC ACTTCCCGGA GGGGCTCGGC GGGCTGGGGG TGTCGCGTGG CCTGCAGGCG
GTCGCCGACG GCATACTGCA GGGCGCCGGC GGACCGGTGC CTCTGGGGCT CAACCCGATG
GGTTACGGCA TGGCGGCGCC GACCATCCGC GAGCACGCCC AGAACGACGA CATCAAACGG
GCCTGGTTGC GGCCGCTGGC GACCACCGAA CACATCTGGT GCCAGTTGTT CTCCGAACCC
GGCGCCGGCT CCGATCTGGC CGGGCTGGCC ACCTCGGCGG TGCCCGACGG TGACGACTGG
GTGATCAACG GCCAGAAGGT GTGGACCAGC CTCGCGCACC GCGCCCGGTG GGGTCTGCTG
CTGGCCCGCA CGAACCCCGA TGTGCCCAAG CACAAGGGTC TGACGTACTT CGTCATCGAC
ATGCACGCAC CGGGTGTCGA GACCCGGCCG CTGCGGCAGA TGACCGGCCA CGCCGAGTTC
AACGAGGTCT ACTTCAGCGA CGCCCGCATC CCCGACGCGC ACCGGCTCGG CGGCGTCGGT
GACGGCTGGC GGGTCGCGAT GACGACGCTG ATGAACGAGC GCAGCGCGCT GGGCGCCAGC
GGCAGCCGCC GCGGTGCGGG CACGATCGCC GACGCCGTCG CGCTGTGGGC GTCGCGCCCC
GAGCGCCACA CACCGGTGCT GCGCGACCGG TTGTCCGAAC TGTGGTTGCG CGCCGAGGCG
CAACGGCTGA CTTCCGAGCG GTCCCGAGCG TCGGCGACCG TCGGCGGCCC GGGTCCGGAG
GGATCGATCG GCAAGCTGGT CGGCGCCGAA CTCAATCAGC GGATCTACCA GTGGTGCATG
GACTTTCTCG GCCCGGAGGG CACGCTGTAC CACAGCTACG CCATGGACAG CGGGGACAAG
AGCGACTGGC GCGGCCCGAT TCAGCAGCGT TTCCTGCGCA GCCGCGCCAA CACCATCGAG
GGCGGCACCT CGGACGTCAT GCGGAACATC CTGGGCGAGC GGGTGCTCGG TCTGCCGGGT
GATCTGCGTG CCGATGCGGG GATGCCGTGG AAGGAGGTGC CGCGTGGCTG A
|
|---|
| Protein sequence | MSTAADIDRV TELANRVVAE YDPKTVLIPE YLGACYDAGL SWVHFPEGLG GLGVSRGLQA
VADGILQGAG GPVPLGLNPM GYGMAAPTIR EHAQNDDIKR AWLRPLATTE HIWCQLFSEP
GAGSDLAGLA TSAVPDGDDW VINGQKVWTS LAHRARWGLL LARTNPDVPK HKGLTYFVID
MHAPGVETRP LRQMTGHAEF NEVYFSDARI PDAHRLGGVG DGWRVAMTTL MNERSALGAS
GSRRGAGTIA DAVALWASRP ERHTPVLRDR LSELWLRAEA QRLTSERSRA SATVGGPGPE
GSIGKLVGAE LNQRIYQWCM DFLGPEGTLY HSYAMDSGDK SDWRGPIQQR FLRSRANTIE
GGTSDVMRNI LGERVLGLPG DLRADAGMPW KEVPRG
|
|---|
| |