Gene Snas_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2909 
Symbol 
ID8884108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3060969 
End bp3062159 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_003511677 
Protein GI291300399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.25619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0238889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCGAGTCCAT CGAACCGGAT CTGACCGCCC GGGTGGCGAC GCTGCTGCGG 
GACCACGACC CGGCCACCAC CGATCCGCAG GAGTTTCGCG GCGCCCTGTT CGACGCCGGA
CTGGCCCGAG TGGACTTTCC GCCGGGACTG GGCGGACTAG GTCTGCCGCA ACGGTTCCAG
AAACTCGTCG ACGCCCGACT GGAAGCCGCC GACGCGCCCA TGCTGCTGCG GGAACACAAC
GGCATCGGCC TGGGCATGGC CGCACCCACC ATCGTGGCCT TCGGTACCGA CGAACAGCGA
CGAACGCTGC TGCGGCCGAT CTTCACCAAC GAACACGTCT ACTGCCAGCT GTTCAGCGAA
CCCGAAGCCG GATCCGACCT GGCGGCGGTG GCCACCAGCG CGCGCCGCGA CGGCGACGAG
TGGATCGTCA ACGGCCAGAA GGTGTGGACC TCGGGAGCCC ACAACGCCGA CATGGCGATC
CTGTTGGCGC GCAGCGACCC GGACCTCCCC AAACACGCGG GACTCACCTA CTTCGTCTGC
GACATGCGCG ATCCCGGCGT GGAGGTCCGG CCACTGCGGC AGCTCACCGG CGAGGCCGAG
TTCAACGAGG TGTTCCTCAC CGACGTCCGC GTTCCCGACT CGCTGCGGCT CGGCGAGATC
GGCCAGGGCT GGAAGGTGGC CACGACGACC CTCAACAACG AACGGGTCGC GATCGGCTCC
GGCGCTCCCC GCGAGGGTGG CATGATCGGC AGGGTCGCCG CCACCTGGCG CGACAATCCA
CAGTGGCGAC ATCCGGGGAT GCACGACCGG CTGATGCGGC TGTGGGTGGA CGCCGAGGCC
ATCCGCATCA CCGGCGAACG ACTCCGGCAG CAACTGGCCA ACGGCCAACC CGGCCCTGAG
GGCTCGGGCA TGAAGGTCCT GTTCGCCCGC TCGGCGCAGG AAGTGTCCGG ATTCGACCTC
GAACTGCGCG GCGAGGACGG CCTGCGCTAC GACGACTGGA CGATGCGGCG ACCCGACAAG
GTCGACTACA CCGGCCGCGA ACCCGGCTAC CGGTACCTGC GCGCCAAGGG CAACTCGATC
GAGGGTGGCA CCTCCGAGAT CCTGCTCAAC GTGATCGCCG AACGGGTCCT GGGACTGGCG
CCCGAACCGC GCGCCGACAA GGACATCGCC TGGAAGGACC TGCCGCGATG A
 
Protein sequence
MSDTESIEPD LTARVATLLR DHDPATTDPQ EFRGALFDAG LARVDFPPGL GGLGLPQRFQ 
KLVDARLEAA DAPMLLREHN GIGLGMAAPT IVAFGTDEQR RTLLRPIFTN EHVYCQLFSE
PEAGSDLAAV ATSARRDGDE WIVNGQKVWT SGAHNADMAI LLARSDPDLP KHAGLTYFVC
DMRDPGVEVR PLRQLTGEAE FNEVFLTDVR VPDSLRLGEI GQGWKVATTT LNNERVAIGS
GAPREGGMIG RVAATWRDNP QWRHPGMHDR LMRLWVDAEA IRITGERLRQ QLANGQPGPE
GSGMKVLFAR SAQEVSGFDL ELRGEDGLRY DDWTMRRPDK VDYTGREPGY RYLRAKGNSI
EGGTSEILLN VIAERVLGLA PEPRADKDIA WKDLPR