More than 300 homologs were found in PanDaTox collection
for query gene Pden_0198 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  100 
 
 
386 aa  786    Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  72.99 
 
 
384 aa  587  1e-166  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  69.17 
 
 
384 aa  558  1e-158  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  69.01 
 
 
383 aa  557  1e-157  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  68.91 
 
 
384 aa  557  1e-157  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  66.15 
 
 
385 aa  541  1e-153  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  65.1 
 
 
385 aa  534  1e-151  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  66.15 
 
 
384 aa  533  1e-150  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  65.1 
 
 
385 aa  534  1e-150  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  66.93 
 
 
388 aa  525  1e-148  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  62.6 
 
 
384 aa  522  1e-147  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  62.6 
 
 
384 aa  522  1e-147  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  60 
 
 
383 aa  504  1e-141  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  62.5 
 
 
380 aa  489  1e-137  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  61.44 
 
 
385 aa  488  1e-137  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  61.44 
 
 
385 aa  488  1e-137  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  62.3 
 
 
382 aa  487  1e-136  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  63.05 
 
 
386 aa  476  1e-133  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  59.95 
 
 
386 aa  473  1e-132  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  60.21 
 
 
382 aa  471  1e-132  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  60.15 
 
 
385 aa  470  1.0000000000000001e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  59.9 
 
 
385 aa  469  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  60.15 
 
 
385 aa  471  1.0000000000000001e-131  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  57.84 
 
 
386 aa  466  9.999999999999999e-131  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  57.95 
 
 
386 aa  463  1e-129  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  59.32 
 
 
390 aa  460  9.999999999999999e-129  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  57.22 
 
 
395 aa  432  1e-120  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  55.18 
 
 
429 aa  432  1e-120  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  57.75 
 
 
398 aa  431  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  56.27 
 
 
385 aa  426  1e-118  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  53.65 
 
 
388 aa  416  9.999999999999999e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  55.41 
 
 
389 aa  412  1e-114  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  56.17 
 
 
418 aa  414  1e-114  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  52.36 
 
 
384 aa  407  1.0000000000000001e-112  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  53.25 
 
 
387 aa  405  1.0000000000000001e-112  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  53.03 
 
 
395 aa  400  9.999999999999999e-111  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  50.79 
 
 
394 aa  385  1e-106  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  50.68 
 
 
390 aa  374  1e-102  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  47.16 
 
 
404 aa  364  1e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  47.52 
 
 
392 aa  363  3e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  45.91 
 
 
388 aa  347  2e-94  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  46.84 
 
 
391 aa  346  4e-94  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  46.84 
 
 
391 aa  346  4e-94  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  46.84 
 
 
391 aa  346  4e-94  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  45.89 
 
 
394 aa  341  2e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  42.67 
 
 
386 aa  321  9.999999999999999e-87  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  44.71 
 
 
380 aa  318  9e-86  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  44.9 
 
 
389 aa  292  6e-78  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  41.58 
 
 
379 aa  291  1e-77  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  40.32 
 
 
379 aa  286  4e-76  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  39.58 
 
 
388 aa  285  8e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  39.41 
 
 
380 aa  283  5.000000000000001e-75  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  42.15 
 
 
376 aa  282  8.000000000000001e-75  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  44.13 
 
 
379 aa  281  2e-74  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  41.32 
 
 
376 aa  280  4e-74  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  41.32 
 
 
376 aa  280  4e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  39.68 
 
 
379 aa  279  5e-74  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  41.53 
 
 
377 aa  279  6e-74  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  41.05 
 
 
376 aa  278  1e-73  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  41.24 
 
 
375 aa  278  1e-73  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  41.05 
 
 
376 aa  277  2e-73  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  278  2e-73  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  41.05 
 
 
376 aa  277  2e-73  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  277  2e-73  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  38.54 
 
 
388 aa  277  2e-73  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  41.05 
 
 
381 aa  277  2e-73  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  42.31 
 
 
378 aa  276  4e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  42.08 
 
 
377 aa  276  5e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  40.63 
 
 
386 aa  276  6e-73  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  38.46 
 
 
381 aa  275  9e-73  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  39.73 
 
 
379 aa  275  1.0000000000000001e-72  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  40.77 
 
 
376 aa  275  1.0000000000000001e-72  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  40.71 
 
 
377 aa  275  1.0000000000000001e-72  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  41.8 
 
 
377 aa  275  1.0000000000000001e-72  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  41.8 
 
 
377 aa  275  1.0000000000000001e-72  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  40.7 
 
 
375 aa  275  1.0000000000000001e-72  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_003296  RS05570  acyl-CoA dehydrogenase oxidoreductase protein  41.55 
 
 
377 aa  274  2.0000000000000002e-72  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.213032 
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  44.13 
 
 
580 aa  274  2.0000000000000002e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
375 aa  273  4.0000000000000004e-72  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  40.22 
 
 
377 aa  273  4.0000000000000004e-72  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  43.84 
 
 
580 aa  273  4.0000000000000004e-72  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  40.77 
 
 
376 aa  273  4.0000000000000004e-72  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  37.83 
 
 
380 aa  273  4.0000000000000004e-72  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  41.3 
 
 
377 aa  273  4.0000000000000004e-72  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
375 aa  273  5.000000000000001e-72  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  40.44 
 
 
377 aa  273  5.000000000000001e-72  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  39.24 
 
 
379 aa  272  6e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  40.44 
 
 
377 aa  272  7e-72  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  42.7 
 
 
375 aa  272  7e-72  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  40.44 
 
 
377 aa  272  7e-72  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  39.78 
 
 
402 aa  272  7e-72  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  41.29 
 
 
386 aa  272  8.000000000000001e-72  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  39.51 
 
 
379 aa  271  1e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_4118  Acyl-CoA dehydrogenase  43.55 
 
 
580 aa  271  1e-71  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.846783  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  39.53 
 
 
386 aa  271  1e-71  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  40.22 
 
 
377 aa  271  1e-71  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  41.13 
 
 
377 aa  271  2e-71  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  41.18 
 
 
375 aa  271  2e-71  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  38.62 
 
 
380 aa  271  2e-71  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3396  acyl-CoA dehydrogenase  41.95 
 
 
351 aa  270  2.9999999999999997e-71  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.581792  normal  0.0907936 
 
 
-
 
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