More than 300 homologs were found in PanDaTox collection
for query gene Avi_0523 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_0523  Response regulator protein  100 
 
 
359 aa  737    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  48.08 
 
 
378 aa  311  1e-83  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  48.07 
 
 
369 aa  306  5.0000000000000004e-82  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  48.07 
 
 
369 aa  306  5.0000000000000004e-82  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  45.99 
 
 
385 aa  299  6e-80  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  47.18 
 
 
487 aa  296  5e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  48.01 
 
 
363 aa  294  1e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  48.01 
 
 
351 aa  294  2e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  45.54 
 
 
353 aa  293  4e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  48.01 
 
 
351 aa  292  5e-78  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_010511  M446_5359  response regulator receiver modulated metal dependent phosphohydrolase  44.78 
 
 
347 aa  290  3e-77  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0670454 
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  47.85 
 
 
345 aa  283  3.0000000000000004e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  42.32 
 
 
350 aa  283  5.000000000000001e-75  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  45.09 
 
 
353 aa  281  2e-74  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  44.58 
 
 
363 aa  280  3e-74  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  43.08 
 
 
399 aa  273  3e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.63 
 
 
353 aa  273  4.0000000000000004e-72  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  43.58 
 
 
344 aa  270  2.9999999999999997e-71  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  40.06 
 
 
382 aa  260  3e-68  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  39.71 
 
 
331 aa  253  5.000000000000001e-66  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  40.72 
 
 
338 aa  252  7e-66  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  40.72 
 
 
338 aa  252  7e-66  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  40.72 
 
 
338 aa  252  8.000000000000001e-66  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  41.09 
 
 
340 aa  249  5e-65  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  39.63 
 
 
379 aa  248  1e-64  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  40.42 
 
 
338 aa  248  1e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  38.92 
 
 
331 aa  246  3e-64  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  40.43 
 
 
338 aa  246  3e-64  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  40.43 
 
 
338 aa  247  3e-64  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  40.43 
 
 
338 aa  246  3e-64  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  38.28 
 
 
354 aa  245  6.999999999999999e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_004347  SO_0860  response regulator  39.82 
 
 
339 aa  245  8e-64  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
339 aa  245  8e-64  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  38.55 
 
 
331 aa  245  8e-64  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
338 aa  243  3.9999999999999997e-63  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 
331 aa  243  3.9999999999999997e-63  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  38.17 
 
 
331 aa  241  2e-62  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  38.17 
 
 
331 aa  241  2e-62  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  37.61 
 
 
353 aa  241  2e-62  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  39.22 
 
 
328 aa  239  5.999999999999999e-62  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  38.39 
 
 
333 aa  237  2e-61  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0399  response regulator receiver modulated metal dependent phosphohydrolase  38.11 
 
 
384 aa  237  2e-61  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  36.5 
 
 
356 aa  237  2e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  37.06 
 
 
354 aa  237  3e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0458  response regulator receiver protein  38.11 
 
 
384 aa  237  3e-61  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  37.39 
 
 
339 aa  237  3e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  38.99 
 
 
346 aa  237  3e-61  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  38.91 
 
 
350 aa  236  3e-61  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  38.92 
 
 
328 aa  237  3e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4963  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
350 aa  235  7e-61  Methylobacterium populi BJ001  Bacteria  normal  0.102256  normal  0.0892849 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  38.44 
 
 
338 aa  234  2.0000000000000002e-60  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  38.3 
 
 
348 aa  233  3e-60  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  38.3 
 
 
348 aa  233  4.0000000000000004e-60  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  36.72 
 
 
337 aa  233  4.0000000000000004e-60  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_011894  Mnod_5340  response regulator receiver modulated metal dependent phosphohydrolase  46.1 
 
 
348 aa  233  5e-60  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.64097  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  38.07 
 
 
350 aa  232  6e-60  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  38.75 
 
 
356 aa  232  6e-60  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  38.02 
 
 
352 aa  232  7.000000000000001e-60  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  36.61 
 
 
347 aa  231  2e-59  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  35.69 
 
 
340 aa  230  2e-59  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  38.49 
 
 
367 aa  229  8e-59  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  35.48 
 
 
348 aa  228  1e-58  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  37.71 
 
 
363 aa  227  2e-58  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  37.31 
 
 
357 aa  227  3e-58  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  37.2 
 
 
379 aa  226  7e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  37.31 
 
 
357 aa  226  7e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  36.81 
 
 
365 aa  225  1e-57  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  37.65 
 
 
357 aa  224  2e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_5034  response regulator receiver modulated metal dependent phosphohydrolase  43.34 
 
 
348 aa  224  2e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.749308  hitchhiker  0.00297277 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  36.33 
 
 
343 aa  221  1.9999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_010172  Mext_4449  metal-dependent phosphohydrolase  48.25 
 
 
358 aa  221  1.9999999999999999e-56  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.508967 
 
 
-
 
NC_011757  Mchl_4913  response regulator receiver modulated metal dependent phosphohydrolase  44.84 
 
 
354 aa  219  6e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.478904  normal  0.760596 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  35.19 
 
 
362 aa  218  1e-55  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  36.44 
 
 
361 aa  216  5e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  37.69 
 
 
359 aa  216  5.9999999999999996e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  40.59 
 
 
358 aa  216  7e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  36.52 
 
 
360 aa  215  9e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.92 
 
 
268 aa  215  9.999999999999999e-55  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  34.96 
 
 
365 aa  215  9.999999999999999e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  36.01 
 
 
361 aa  213  3.9999999999999995e-54  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  35.28 
 
 
379 aa  213  3.9999999999999995e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  35.88 
 
 
370 aa  209  7e-53  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  37.65 
 
 
368 aa  208  1e-52  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_013946  Mrub_2733  response regulator receiver modulated metal dependent phosphohydrolase  37.31 
 
 
346 aa  208  1e-52  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1406  response regulator  36.05 
 
 
351 aa  205  8e-52  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  35.4 
 
 
395 aa  204  2e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  34.2 
 
 
371 aa  203  3e-51  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 
360 aa  203  5e-51  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  36.39 
 
 
368 aa  201  9.999999999999999e-51  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  35.6 
 
 
365 aa  201  1.9999999999999998e-50  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  35.18 
 
 
391 aa  200  1.9999999999999998e-50  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  34.32 
 
 
377 aa  199  5e-50  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  36.08 
 
 
368 aa  199  6e-50  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  36.83 
 
 
362 aa  199  7e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  36.26 
 
 
377 aa  198  9e-50  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_002939  GSU1891  response regulator  32.79 
 
 
379 aa  198  1.0000000000000001e-49  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  37.7 
 
 
377 aa  198  1.0000000000000001e-49  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  34.77 
 
 
384 aa  197  2.0000000000000003e-49  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  34.32 
 
 
377 aa  197  2.0000000000000003e-49  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  32.21 
 
 
369 aa  197  3e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
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