Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0523 |
Symbol | |
ID | 7388934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 445552 |
End bp | 446631 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650162 |
Product | Response regulator protein |
Protein accession | YP_002548375 |
Protein GI | 222147418 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGTTG ATGATAACAA TACCAATTTG AAACTGCTGA CCCGCCTGGT CAAGAAAATC GACCACTGCG AGCCCGTGGC CTTTTCAACC CCGGAAGAGG TGCTCTCCGC GCTGCCGGAG CTGGATTTCG ATGTTGCCAT CATCGATTAC CAGATGCCGG TATATAACGG CGTCGAGCTT TACACTGAGA TCGTAAGGTT CGAGAAATAT GCCCAGGTGC CGGTGGTATT CATCACCGCC GACAAGGATA TGACAACGCG GATGGCCGCG TTGAATGCCG GGGCTATCGA CTTCCTGACC AAGCCGGTTA ACCCGATCGA ATTCCAGGCC CGCATCCACA ATATCGTCAG CCTGTCGATT GCCCGTCGTC AGCTGGCGGA CCAGGCTGAA TGGCTGCGAC GCGAAGTGGA CAGGGCCGTG GGCGAGTTGC GGCAGCGCGA ACAGGAAATC ATTGAACGCC TGACGCTGGC AGCCGGCTAC AAGGACCCGG ATACGTCGCG CCATACCTTG CGGGTCGCCG CCTATGCACA GGCCATCGCC CGTGAAATGG GATTGCCGGA GCAGTTCTGC ACCGATCTGA AGCTGGCAGC GCCGATGCAT GACATCGGCA AGGTCGCCAT GCCCGACACG GTCTTGCTCA AGCAGGGCAG GTTGACCGAA TCCGAATATC GCCAGATGCA ATCCCACGCC CAGATCGGCA GTGACATTCT CGCCCAGTCT CATTCCTCGC TGCTCCAGCT TGCCGCTGAA ATCGCCGCCA GCCACCATGA GCGCTGGGAT GGGCAAGGCT ATCCCAACCG CCTGGCAGGC GATGCCATTC CCCTGTCCGG CCGGATCGTT TGTATTGCCG ACAATTTCGA CGCCCTGACC ACTGAGCGCC CCTATAAGCC TGCCTGGTCC TATGAACGGA CTGTGGAGCA TGTGTTGGCG CGGGCTGGAA GTCAGTTCGA CCCGGCCTGC GTTGCCGCAT TTGAACGGGC GCTACCGGCA ATCCATGAGA TTATTGAGGC CGACCGGCGT GAACAGGCCG AGGAAGCAGC CAGAAAGGCC GCTGCCCTGC CGTTGGACAA AATCGCCTGA
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Protein sequence | MLVDDNNTNL KLLTRLVKKI DHCEPVAFST PEEVLSALPE LDFDVAIIDY QMPVYNGVEL YTEIVRFEKY AQVPVVFITA DKDMTTRMAA LNAGAIDFLT KPVNPIEFQA RIHNIVSLSI ARRQLADQAE WLRREVDRAV GELRQREQEI IERLTLAAGY KDPDTSRHTL RVAAYAQAIA REMGLPEQFC TDLKLAAPMH DIGKVAMPDT VLLKQGRLTE SEYRQMQSHA QIGSDILAQS HSSLLQLAAE IAASHHERWD GQGYPNRLAG DAIPLSGRIV CIADNFDALT TERPYKPAWS YERTVEHVLA RAGSQFDPAC VAAFERALPA IHEIIEADRR EQAEEAARKA AALPLDKIA
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