174 homologs were found in PanDaTox collection
for query gene Rleg_7015 on replicon NC_012858
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012858  Rleg_7015  putative transcriptional regulator, Crp/Fnr family  100 
 
 
241 aa  491  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0954558  normal 
 
 
-
 
NC_012853  Rleg_5762  putative transcriptional regulator, Crp/Fnr family  75.42 
 
 
241 aa  378  1e-104  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4765  putative transcriptional regulator, Crp/Fnr family  63.98 
 
 
244 aa  321  6e-87  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.156733  normal  0.417355 
 
 
-
 
NC_012853  Rleg_5764  putative transcriptional regulator, Crp/Fnr family  60 
 
 
237 aa  300  2e-80  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6894  putative transcriptional regulator, Crp/Fnr family  59.41 
 
 
241 aa  293  2e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.744269 
 
 
-
 
NC_012853  Rleg_5598  putative transcriptional regulator, Crp/Fnr family  59.66 
 
 
239 aa  286  2e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  decreased coverage  0.00118165 
 
 
-
 
NC_012850  Rleg_0741  putative transcriptional regulator, Crp/Fnr family  57.74 
 
 
241 aa  286  2e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6918  putative transcriptional regulator, Crp/Fnr family  58.12 
 
 
255 aa  271  5.000000000000001e-72  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5879  putative transcriptional regulator, Crp/Fnr family  59.53 
 
 
255 aa  260  1e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.450162  normal 
 
 
-
 
NC_012853  Rleg_5837  putative transcriptional regulator, Crp/Fnr family  56.84 
 
 
255 aa  255  4e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.561164  normal 
 
 
-
 
NC_012853  Rleg_5885  putative transcriptional regulator, Crp/Fnr family  62.56 
 
 
219 aa  246  2e-64  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5843  putative transcriptional regulator, Crp/Fnr family  50.22 
 
 
254 aa  197  1.0000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.918646  normal 
 
 
-
 
NC_012853  Rleg_5568  putative transcriptional regulator, Crp/Fnr family  46.61 
 
 
239 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.192457  normal  0.0307688 
 
 
-
 
NC_011894  Mnod_3012  cyclic nucleotide-binding protein  45.76 
 
 
242 aa  195  6e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.791421  n/a   
 
 
-
 
NC_010172  Mext_0788  cyclic nucleotide-binding  43.59 
 
 
236 aa  192  5e-48  Methylobacterium extorquens PA1  Bacteria  normal  0.417677  normal 
 
 
-
 
NC_010172  Mext_0789  cyclic nucleotide-binding  43.16 
 
 
240 aa  191  1e-47  Methylobacterium extorquens PA1  Bacteria  normal  0.424436  normal 
 
 
-
 
NC_010505  Mrad2831_2421  Crp/FNR family transcriptional regulator  45.89 
 
 
239 aa  185  6e-46  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.269594  normal 
 
 
-
 
NC_011757  Mchl_3376  cyclic nucleotide-binding protein  41.63 
 
 
236 aa  184  1.0000000000000001e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0075  hypothetical protein  43.4 
 
 
237 aa  183  2.0000000000000003e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1834  cyclic nucleotide-binding protein  42.74 
 
 
241 aa  182  3e-45  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5233  putative transcriptional regulator, Crp/Fnr family  41.56 
 
 
384 aa  181  1e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222219 
 
 
-
 
NC_011988  Avi_5594  hypothetical protein  43.61 
 
 
238 aa  180  1e-44  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0784  hypothetical protein  42.55 
 
 
237 aa  179  2.9999999999999997e-44  Methylobacterium extorquens PA1  Bacteria  normal  0.195176  normal 
 
 
-
 
NC_011757  Mchl_3386  cyclic nucleotide-binding protein  42.55 
 
 
237 aa  177  1e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0061  cyclic nucleotide-binding protein  42.55 
 
 
237 aa  177  1e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6128  putative transcriptional regulator, Crp/Fnr family  43.91 
 
 
236 aa  175  6e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2074  putative transcriptional regulator, Crp/Fnr family  41.03 
 
 
246 aa  165  5.9999999999999996e-40  Methylobacterium populi BJ001  Bacteria  normal  0.83722  normal 
 
 
-
 
NC_011757  Mchl_3374  transcriptional regulator, Crp/Fnr family  44.16 
 
 
256 aa  164  1.0000000000000001e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3860  cyclic nucleotide-binding protein  42.55 
 
 
237 aa  159  5e-38  Methylobacterium populi BJ001  Bacteria  normal  normal  0.123136 
 
 
-
 
NC_009668  Oant_4306  CRP/FNR family transcriptional regulator  35.78 
 
 
236 aa  157  2e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2120  cyclic nucleotide-binding  38.3 
 
 
243 aa  156  2e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0341739 
 
 
-
 
NC_011757  Mchl_2397  cyclic nucleotide-binding protein  38.3 
 
 
243 aa  156  3e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4307  cyclic nucleotide-binding protein  36.21 
 
 
243 aa  154  2e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2533  cyclic nucleotide-binding domain-containing protein  34.65 
 
 
245 aa  145  7.0000000000000006e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.23322 
 
 
-
 
NC_011894  Mnod_5606  cyclic nucleotide-binding protein  35.04 
 
 
241 aa  141  7e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1833  Crp/FNR family transcriptional regulator  40.85 
 
 
237 aa  134  9.999999999999999e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_4275  cyclic nucleotide-binding protein  32.74 
 
 
246 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4335  putative transcriptional regulator, Crp/Fnr family  32.74 
 
 
246 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.157616 
 
 
-
 
NC_008009  Acid345_2702  cyclic nucleotide-binding protein  33.04 
 
 
230 aa  129  4.0000000000000003e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5993  transcriptional regulator, Crp/Fnr family  33.33 
 
 
246 aa  126  4.0000000000000003e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0397  CRP/FNR family transcriptional regulator  35.53 
 
 
244 aa  125  4.0000000000000003e-28  Halorhodospira halophila SL1  Bacteria  normal  0.934312  n/a   
 
 
-
 
NC_007778  RPB_2486  cyclic nucleotide-binding domain-containing protein  33.48 
 
 
266 aa  124  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.215074  normal 
 
 
-
 
NC_008340  Mlg_1115  Crp/FNR family transcriptional regulator  34.82 
 
 
250 aa  123  2e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.804671  normal  0.524469 
 
 
-
 
NC_011663  Sbal223_1637  transcriptional regulator, Crp/Fnr family  34.08 
 
 
232 aa  123  3e-27  Shewanella baltica OS223  Bacteria  normal  0.0811489  hitchhiker  0.00000101787 
 
 
-
 
NC_011884  Cyan7425_4411  cyclic nucleotide-binding protein  34.51 
 
 
238 aa  123  3e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.76047 
 
 
-
 
NC_009052  Sbal_2723  CRP/FNR family transcriptional regulator  34.08 
 
 
232 aa  122  4e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2740  CRP/FNR family transcriptional regulator  33.63 
 
 
232 aa  122  4e-27  Shewanella baltica OS185  Bacteria  hitchhiker  0.00150781  n/a   
 
 
-
 
NC_010501  PputW619_2132  Crp/FNR family transcriptional regulator  32.74 
 
 
247 aa  120  9.999999999999999e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.0511998 
 
 
-
 
NC_008781  Pnap_1315  CRP/FNR family transcriptional regulator  32.17 
 
 
238 aa  121  9.999999999999999e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.63413  normal 
 
 
-
 
NC_011884  Cyan7425_4412  cyclic nucleotide-binding protein  34.07 
 
 
234 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.758145 
 
 
-
 
NC_008061  Bcen_5274  Crp/FNR family transcriptional regulator  35.68 
 
 
239 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5585  Crp/FNR family transcriptional regulator  35.68 
 
 
239 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.808754 
 
 
-
 
NC_007348  Reut_B5838  cyclic nucleotide-binding  32.31 
 
 
242 aa  120  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.358125  n/a   
 
 
-
 
NC_008061  Bcen_5290  Crp/FNR family transcriptional regulator  35.33 
 
 
239 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.420985  n/a   
 
 
-
 
NC_008543  Bcen2424_5568  Crp/FNR family transcriptional regulator  35.33 
 
 
239 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3549  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
239 aa  118  7.999999999999999e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3627  CRP/FNR family transcriptional regulator  31.53 
 
 
245 aa  117  1.9999999999999998e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.460124 
 
 
-
 
NC_010552  BamMC406_3898  Crp/FNR family transcriptional regulator  34.78 
 
 
239 aa  117  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.472058  normal 
 
 
-
 
NC_007614  Nmul_A0876  transcriptional regulator-related protein  32.46 
 
 
258 aa  116  3e-25  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2958  cyclic nucleotide-binding  32.88 
 
 
248 aa  116  3e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.369311  normal 
 
 
-
 
NC_010511  M446_4966  cyclic nucleotide-binding protein  32.89 
 
 
255 aa  116  3e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.916319  normal 
 
 
-
 
NC_013889  TK90_1390  transcriptional regulator, Crp/Fnr family  31.28 
 
 
236 aa  115  3.9999999999999997e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1684  Crp/FNR family transcriptional regulator  34.78 
 
 
239 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1693  Crp/FNR family transcriptional regulator  34.78 
 
 
239 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.3052  normal 
 
 
-
 
NC_008061  Bcen_5104  Crp/FNR family transcriptional regulator  34.78 
 
 
243 aa  115  6.9999999999999995e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5755  Crp/FNR family transcriptional regulator  34.78 
 
 
243 aa  115  6.9999999999999995e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.132685 
 
 
-
 
NC_010515  Bcenmc03_4421  Crp/FNR family transcriptional regulator  34.78 
 
 
243 aa  115  6.9999999999999995e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1669  Crp/FNR family transcriptional regulator  33.48 
 
 
244 aa  115  7.999999999999999e-25  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0359086 
 
 
-
 
NC_011004  Rpal_3464  putative transcriptional regulator, Crp/Fnr family  31.7 
 
 
257 aa  115  7.999999999999999e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0401211  n/a   
 
 
-
 
NC_007614  Nmul_A0678  transcriptional regulator-related protein  31.17 
 
 
259 aa  114  1.0000000000000001e-24  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3820  cyclic nucleotide-binding domain-containing protein  34.24 
 
 
239 aa  114  1.0000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  0.051999  normal 
 
 
-
 
NC_007953  Bxe_C0542  Crp/FNR family transcriptional regulator  34.24 
 
 
239 aa  114  1.0000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  0.936935  normal 
 
 
-
 
NC_008781  Pnap_1316  cyclic nucleotide-binding domain-containing protein  35.71 
 
 
247 aa  114  1.0000000000000001e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.327041  normal 
 
 
-
 
NC_007951  Bxe_A2530  Crp/FNR family transcriptional regulator  33.48 
 
 
244 aa  114  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.201087 
 
 
-
 
NC_010681  Bphyt_1714  transcriptional regulator, Crp/Fnr family  33.48 
 
 
244 aa  114  2.0000000000000002e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0520  Crp/FNR family transcriptional regulator  35.33 
 
 
239 aa  113  3e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1787  CRP/FNR family transcriptional regulator  35.26 
 
 
232 aa  113  3e-24  Shewanella putrefaciens CN-32  Bacteria  normal  0.22283  n/a   
 
 
-
 
NC_009485  BBta_1631  CRP/FNR family transcriptional regulator  29.87 
 
 
248 aa  113  3e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3744  cyclic nucleotide-binding protein  32.17 
 
 
247 aa  112  5e-24  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_0177  Crp/FNR family transcriptional regulator  33.15 
 
 
238 aa  111  8.000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2891  hypothetical protein  31.86 
 
 
269 aa  111  9e-24  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0045  hypothetical protein  31.86 
 
 
269 aa  111  1.0000000000000001e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4113  CRP/FNR family transcriptional regulator  35.64 
 
 
260 aa  111  1.0000000000000001e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0821  hypothetical protein  31.86 
 
 
312 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3639  CRP/FNR family transcriptional regulator  35.64 
 
 
260 aa  111  1.0000000000000001e-23  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2194  hypothetical protein  31.86 
 
 
269 aa  111  1.0000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.396995  n/a   
 
 
-
 
NC_009074  BURPS668_0645  hypothetical protein  31.86 
 
 
269 aa  111  1.0000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0659  hypothetical protein  31.86 
 
 
269 aa  111  1.0000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2513  hypothetical protein  31.86 
 
 
269 aa  111  1.0000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  0.225416  n/a   
 
 
-
 
NC_007952  Bxe_B1519  Crp/FNR family transcriptional regulator  34.24 
 
 
239 aa  110  2.0000000000000002e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4389  CRP/FNR family transcriptional regulator  32.74 
 
 
260 aa  110  2.0000000000000002e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2550  transcriptional regulator-related protein  35.12 
 
 
230 aa  109  3e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_0413  transcriptional regulator, Crp/Fnr family  31.25 
 
 
240 aa  110  3e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.37826  n/a   
 
 
-
 
NC_010551  BamMC406_1130  Crp/FNR family transcriptional regulator  35.17 
 
 
267 aa  109  5e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.440884 
 
 
-
 
NC_011004  Rpal_3818  transcriptional regulator, Crp/Fnr family  35.56 
 
 
265 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.827272  n/a   
 
 
-
 
NC_009654  Mmwyl1_1963  CRP/FNR family transcriptional regulator  31.25 
 
 
246 aa  108  9.000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.555453  normal 
 
 
-
 
NC_007651  BTH_I0534  hypothetical protein  31.42 
 
 
344 aa  107  1e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2260  transcriptional regulator, Crp/Fnr family  29.36 
 
 
254 aa  108  1e-22  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1444  Crp/FNR family transcriptional regulator  33.04 
 
 
231 aa  107  1e-22  Caulobacter sp. K31  Bacteria  normal  normal  0.382452 
 
 
-
 
NC_008392  Bamb_6495  Crp/FNR family transcriptional regulator  34.78 
 
 
267 aa  108  1e-22  Burkholderia ambifaria AMMD  Bacteria  normal  0.956501  normal 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>