Gene Rleg_5598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5598 
Symbol 
ID8016824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp178993 
End bp179712 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content59% 
IMG OID644827764 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_002978964 
Protein GI241518336 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00118165 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCCACC AATCGACCGT CGAGAACACT CTACTGAAAT TGTTGAGCGT AGACGGTTTC 
GCACGCCTCT CGGGAGAGAT GGAGCGCGTC GACCTTCCAT TGCGGCACGT TCTTGTTGCT
AGCGATGTCC CATCCACGCA TGTTTGTTTC CTGGAAAGGG GCCTGGCATC CATGGTTGTC
AGCAGCATCG ACGAAGAAGT TGTGGAAATT GGCCACATCG GGCGCGAGGG CGCATCCGGC
ATGCACGTCG TCCTGGCGGT AGAGACCACC CCCACGCGCA CGTTCATGCA GGTCGCGGGG
TCGGGGATTA TGGTGCCGAT GGAGACATTT CAGCGCGCGC TCGCCGATGA TCCCGAGATG
AAGGATTTCT TCCTTCGCTA TGTTCACACA ACCGTGCTGC AGCTCGCCCA TTCGGCGCTC
GCCAACGCCC GCTACAATAT GCATGAGCGG CTGGCTCGAT GGATCCTGAT GTGTCACGAC
CGCCTCGAAG GCAATGACCT GGCCATTACC CATGAATTTC TGGCATTGAT GCTCGGTGTC
CGGCGTTCGG GCGTCACCAA TGAGCTACAC GTGCTTGAGG GCGTCCACGC CATCCGATCG
ACCCGCGGAA ACGTGCGAAT AGTGGACAGG GAAAAATTGA TCGAAATCGC CGGTGGCTGT
TATGGAGTGC CGGAGCGCGA ATATGAGAGG TTGCTGGGTC TTCCGCTCGG CGCCAGGTAG
 
Protein sequence
MPHQSTVENT LLKLLSVDGF ARLSGEMERV DLPLRHVLVA SDVPSTHVCF LERGLASMVV 
SSIDEEVVEI GHIGREGASG MHVVLAVETT PTRTFMQVAG SGIMVPMETF QRALADDPEM
KDFFLRYVHT TVLQLAHSAL ANARYNMHER LARWILMCHD RLEGNDLAIT HEFLALMLGV
RRSGVTNELH VLEGVHAIRS TRGNVRIVDR EKLIEIAGGC YGVPEREYER LLGLPLGAR