Gene Rleg_5843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5843 
Symbol 
ID8016478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp414101 
End bp414865 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID644827974 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_002979174 
Protein GI241518546 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.918646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA TGCGTTCTGC CAAAAGCTAT TTCGACGATT TTACCATGAA CCAACTGTCT 
ACATTGCCCG CTGGCCGATC GAACCTATTG CTCCGCGCCT TATCGCAAGC GGATGGCGAT
TTGCTTTGGG ATCACCTCGA GCCCGTCGCC CTCAACAGGG GCGATGTGTG CATAGAGAGC
CAGCGACCGC TGACCCACGT ATACTTTCTG GACGGCGGCT TGGGTTCGAC GGTAATGCCT
GACGAGGTTT ACGGCTCGGC CGAGATCGGT GCGCAGGGCT ACGAAGGGCT TATTGGCGTG
CCGGTCATCC TTGGCGCCAT GCAAACGCCA CACAAGACAT TCATGCAGGT TGGCGGTCCA
GCTAGACGCA TAGCGGTCGC ACCCCTTTTG AGAGCGATCG ACGAGAGCGA ATCCCTGCGA
AAGCTTCTCC TGCGCTATGT TCACGTCTTC CAGCTGCAAG TCGGTCAGAC CGCTTACGCC
AATGCCCGCT ACAACGTTGA AGAACGGCTC GCCCGCTGGA TATTGATGTC GGCAGATCGT
CTGGGGTCAC CCCTTTCCCT CACCCACGAC TTTCTGTCGC TGATGCTGGG CGTGAGACGG
CCCAGCGTCA CTGATGCAAC CCACATTCTT GAAGGAGAGC GGCTCATCAA GGCCAGCCGG
GGCACAATCG AGATCATTGA CCGTGCTGGC TTGGCCAAAC GGTCTAACGG TTGCTACGGT
GTATCGGAAG CAGAGTACGA GCGGCTTATA GGCCCGTGGC GTTGA
 
Protein sequence
MAVMRSAKSY FDDFTMNQLS TLPAGRSNLL LRALSQADGD LLWDHLEPVA LNRGDVCIES 
QRPLTHVYFL DGGLGSTVMP DEVYGSAEIG AQGYEGLIGV PVILGAMQTP HKTFMQVGGP
ARRIAVAPLL RAIDESESLR KLLLRYVHVF QLQVGQTAYA NARYNVEERL ARWILMSADR
LGSPLSLTHD FLSLMLGVRR PSVTDATHIL EGERLIKASR GTIEIIDRAG LAKRSNGCYG
VSEAEYERLI GPWR