| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2533 |
|---|
| Symbol | |
|---|
| ID | 3970999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2744606 |
|---|
| End bp | 2745343 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637925641 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_532403 |
|---|
| Protein GI | 90424033 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.23322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGT CGCGGCGAAA CAGACTGCTC GAAATGTTGC CGCGGGACGA CCTGAACCGG
TTGCGGCCGC ATCTGCACAG CGTCGTGCTC GACTACAAGA TGCCGCTCTA CGAAGCCTTC
GCGCCGATCA ACGACGTGTA CTTTCCGGTC GACGGCGTGG CCTCGCTGGT GTCGACCATG
GCCGACGGCT CATCAGCCGA GATCGGCACC ATCGGCAATG AAGGCATCGT CGGCACCCCG
ATCATTCTCG GCGACACTGT CGCGCCGACC AATGTCTACG TCCAGGTGCC GGGCCACGGA
CTGAAGCTGA AGGCCGAGAT CCTGCGGCAG GCGCTGCAGC AAAGCGTCGC CACCCGCACC
CTGATGCTGC ACTACGTCCA TGCGTTCTTC AATCAGGTGG CGCAGTCGGC GGTGTGCAAT
CATTTCCATT CGATCGAGCA GCGCTGCTGC CGGTGGCTGC TGATGACCCA CGACCGGGTG
CAGGCGGAGG ATTTCTTGCT GACCCAGGAG TTCCTGGCGA TGATGCTCGG CGCGCGACGC
TCCAGCGTCA CCGAGGCGGC GAAGCGACTG AAGAATCGCG GACTGATTAG TTACGTGCGC
GGCCACGTCA CCATGCTCGA CCGCGCCGGG ATCGAACGCA CCTCGTGCGA ATGCTACGCG
GTGAGCAAGG CGGAATTCGA CCGGCTGCTG GGCGCGCCGA AAGGCCTCGG TGCGACGCTG
GAATCGGCCA ACGGCTGA
|
|---|
| Protein sequence | MIQSRRNRLL EMLPRDDLNR LRPHLHSVVL DYKMPLYEAF APINDVYFPV DGVASLVSTM
ADGSSAEIGT IGNEGIVGTP IILGDTVAPT NVYVQVPGHG LKLKAEILRQ ALQQSVATRT
LMLHYVHAFF NQVAQSAVCN HFHSIEQRCC RWLLMTHDRV QAEDFLLTQE FLAMMLGARR
SSVTEAAKRL KNRGLISYVR GHVTMLDRAG IERTSCECYA VSKAEFDRLL GAPKGLGATL
ESANG
|
|---|
| |