| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0177 |
|---|
| Symbol | |
|---|
| ID | 4012221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 193033 |
|---|
| End bp | 193749 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637939861 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_547040 |
|---|
| Protein GI | 91786088 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTT CCCCCGATCC CCAAAAAAAC CAGCTGCTCG CCGCGCTGCC AGATGCCGAG
TGGCAGCGCT GGCTGCCACA ACTGGAATTC GTCGATATGC CGCTGGGCCA GGTGCTGTAC
GAGTCGGGTG GCACATTGAG CCACGTGTAT TTTCCAACGA CAGCCATCGT CTCCTTGCTG
TATGTGATGG AAAACGGCGC CTCGGCCGAG ATTGCCGTCG TGGGCAACGA GGGCGTCGTC
GGCATTTCGC TGTTCATGGG CGGCGAGTCC ACGCCCAGCC GTGCGGTGGT GCAAAGCGCT
GGCCAGGGTT TTCGGCTGAA GGCGCAGTTG ATGAAAGACG AGTTTAAAAA AACGCCGGTG
CTGCACCTGA TGCTGCGCTA CACCCAGGCG CTGATCACGC AGATGGCGCA AACCGCGGTG
TGCAACCGCC ACCATTCGCT GGACCAGCAG CTGTGCCGCT GGCTGCTGCT GAGCCTGGAC
CGCCTGCAGG GCAACGAGTT GGTGATGACG CAGGAGTTGA TCGCCAACAT GCTCGGCGTG
CGCCGCGAAG GCGTGACGGA GGGCGCGCTC AAGCTGCAAA AGGCCGGGCT GATCAGCTAT
GCGCGCGGCC GCATCTCCGT GCTGGACCGC CAGGGGCTGG AGCAGCGCAC CTGCGAGTGT
TATGCGGTGG TCAAGAAGGA GTACGACCGC CTGCTTCCCC AGCGGCTGGC GGCTTGA
|
|---|
| Protein sequence | MAISPDPQKN QLLAALPDAE WQRWLPQLEF VDMPLGQVLY ESGGTLSHVY FPTTAIVSLL
YVMENGASAE IAVVGNEGVV GISLFMGGES TPSRAVVQSA GQGFRLKAQL MKDEFKKTPV
LHLMLRYTQA LITQMAQTAV CNRHHSLDQQ LCRWLLLSLD RLQGNELVMT QELIANMLGV
RREGVTEGAL KLQKAGLISY ARGRISVLDR QGLEQRTCEC YAVVKKEYDR LLPQRLAA
|
|---|
| |