More than 300 homologs were found in PanDaTox collection
for query gene RS05577 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS05577  transcription regulator protein  100 
 
 
186 aa  380  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  0.47707  normal  0.300732 
 
 
-
 
NC_010682  Rpic_2003  transcriptional regulator, AsnC family  80.57 
 
 
173 aa  283  1.0000000000000001e-75  Ralstonia pickettii 12J  Bacteria  normal  0.647714  normal 
 
 
-
 
NC_012856  Rpic12D_1696  transcriptional regulator, AsnC family  85.99 
 
 
173 aa  281  3.0000000000000004e-75  Ralstonia pickettii 12D  Bacteria  normal  0.346249  normal 
 
 
-
 
NC_012791  Vapar_5098  transcriptional regulator, AsnC family  84.67 
 
 
169 aa  265  2e-70  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0951  putative leucine-responsive regulatory protein  75.88 
 
 
169 aa  263  1e-69  Burkholderia mallei ATCC 23344  Bacteria  normal  0.191831  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0345  Lrp regulator  75.88 
 
 
169 aa  263  1e-69  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1881  putative leucine-responsive regulatory protein  75.88 
 
 
169 aa  263  1e-69  Burkholderia pseudomallei 668  Bacteria  normal  0.112233  n/a   
 
 
-
 
NC_008835  BMA10229_0217  putative leucine-responsive regulatory protein  75.88 
 
 
169 aa  263  1e-69  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3597  AsnC family transcriptional regulator  77.44 
 
 
173 aa  259  1e-68  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.680866 
 
 
-
 
NC_007650  BTH_II1100  leucine-responsive regulatory protein, putative  75.29 
 
 
169 aa  259  2e-68  Burkholderia thailandensis E264  Bacteria  normal  0.121035  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1797  putative leucine-responsive regulatory protein  79.33 
 
 
152 aa  255  2e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0428  putative leucine-responsive regulatory protein  79.33 
 
 
152 aa  255  2e-67  Burkholderia mallei SAVP1  Bacteria  normal  0.749844  n/a   
 
 
-
 
NC_009079  BMA10247_A1387  putative leucine-responsive regulatory protein  79.33 
 
 
152 aa  255  2e-67  Burkholderia mallei NCTC 10247  Bacteria  normal  0.292932  n/a   
 
 
-
 
NC_010676  Bphyt_5396  transcriptional regulator, AsnC family  79.08 
 
 
175 aa  254  7e-67  Burkholderia phytofirmans PsJN  Bacteria  normal  0.1611  normal  0.0284366 
 
 
-
 
NC_008782  Ajs_3876  AsnC family transcriptional regulator  69.19 
 
 
191 aa  253  1.0000000000000001e-66  Acidovorax sp. JS42  Bacteria  normal  normal  0.990954 
 
 
-
 
NC_011992  Dtpsy_3149  transcriptional regulator, AsnC family  73.53 
 
 
169 aa  251  4.0000000000000004e-66  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5406  AsnC family transcriptional regulator  76.25 
 
 
169 aa  251  4.0000000000000004e-66  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0870  AsnC family transcriptional regulator  80.67 
 
 
169 aa  251  5.000000000000001e-66  Burkholderia xenovorans LB400  Bacteria  normal  0.592101  normal  0.410533 
 
 
-
 
NC_008543  Bcen2424_3375  AsnC family transcriptional regulator  78.67 
 
 
166 aa  248  5e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4141  AsnC family transcriptional regulator  78.67 
 
 
166 aa  248  5e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.845485  normal 
 
 
-
 
NC_008061  Bcen_4793  AsnC family transcriptional regulator  78.67 
 
 
166 aa  248  5e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1802  regulatory proteins, AsnC/Lrp  79.33 
 
 
168 aa  247  7e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.596593  normal  0.185303 
 
 
-
 
NC_008752  Aave_4492  AsnC family transcriptional regulator  76.82 
 
 
178 aa  247  7e-65  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.104876 
 
 
-
 
NC_012912  Dd1591_3619  transcriptional regulator, AsnC family  68.24 
 
 
174 aa  245  3e-64  Dickeya zeae Ech1591  Bacteria  normal  0.378157  n/a   
 
 
-
 
NC_004578  PSPTO_3674  transcriptional regulator, AsnC family  71.1 
 
 
172 aa  244  4.9999999999999997e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5214  AsnC family transcriptional regulator  75 
 
 
166 aa  233  1.0000000000000001e-60  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3309  AsnC family transcriptional regulator  76.62 
 
 
166 aa  230  8.000000000000001e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0359106 
 
 
-
 
NC_008391  Bamb_5156  AsnC family transcriptional regulator  78 
 
 
166 aa  228  4e-59  Burkholderia ambifaria AMMD  Bacteria  normal  0.949798  normal 
 
 
-
 
NC_007511  Bcep18194_B2859  AsnC family transcriptional regulator  77.33 
 
 
166 aa  226  1e-58  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3496  transcriptional regulator, AsnC family  72.3 
 
 
166 aa  216  2e-55  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3829  AsnC family transcriptional regulator  62 
 
 
154 aa  192  3e-48  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008760  Pnap_4759  AsnC family transcriptional regulator  60 
 
 
154 aa  190  1e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4128  AsnC family transcriptional regulator  50.68 
 
 
158 aa  160  1e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.472167 
 
 
-
 
NC_010511  M446_0270  AsnC family transcriptional regulator  51.66 
 
 
153 aa  159  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0235772 
 
 
-
 
NC_011894  Mnod_5478  transcriptional regulator, AsnC family  51.35 
 
 
159 aa  158  5e-38  Methylobacterium nodulans ORS 2060  Bacteria  hitchhiker  0.00532694  n/a   
 
 
-
 
NC_010505  Mrad2831_1520  AsnC family transcriptional regulator  47.37 
 
 
161 aa  156  1e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.186133 
 
 
-
 
NC_011988  Avi_5854  transcriptional regulator AsnC family  47.65 
 
 
154 aa  154  5.0000000000000005e-37  Agrobacterium vitis S4  Bacteria  normal  0.283815  n/a   
 
 
-
 
NC_009622  Smed_6457  AsnC family transcriptional regulator  48.67 
 
 
158 aa  154  6e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.545436 
 
 
-
 
NC_010338  Caul_1045  AsnC family transcriptional regulator  46.75 
 
 
155 aa  145  4.0000000000000006e-34  Caulobacter sp. K31  Bacteria  normal  0.596576  normal  0.823935 
 
 
-
 
NC_009457  VC0395_A1494  leucine-responsive transcriptional regulator  47.33 
 
 
164 aa  142  4e-33  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000000974852  n/a   
 
 
-
 
NC_009783  VIBHAR_01796  leucine-responsive transcriptional regulator  47.33 
 
 
164 aa  142  4e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003880  leucine-responsive regulatory protein  46.67 
 
 
164 aa  140  8e-33  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00000693258  n/a   
 
 
-
 
NC_009719  Plav_2822  AsnC family transcriptional regulator  46.05 
 
 
158 aa  140  8e-33  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.217238  normal  0.448359 
 
 
-
 
CP001509  ECD_00893  DNA-binding transcriptional dual regulator, leucine-binding  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2754  transcriptional regulator, AsnC family  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000328569  n/a   
 
 
-
 
NC_011353  ECH74115_1051  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000229844  normal 
 
 
-
 
NC_010658  SbBS512_E2439  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000000889772  n/a   
 
 
-
 
NC_012892  B21_00900  hypothetical protein  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0964  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000271902  n/a   
 
 
-
 
NC_010468  EcolC_2707  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000640359  normal 
 
 
-
 
NC_009800  EcHS_A0994  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli HS  Bacteria  decreased coverage  0.0000000000000266294  n/a   
 
 
-
 
NC_009832  Spro_1682  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Serratia proteamaculans 568  Bacteria  normal  0.94162  normal  0.324618 
 
 
-
 
NC_009436  Ent638_1413  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Enterobacter sp. 638  Bacteria  decreased coverage  0.0000135875  normal 
 
 
-
 
NC_010498  EcSMS35_2231  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  3.9999999999999997e-32  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000028804  normal 
 
 
-
 
NC_011080  SNSL254_A0993  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000182939  normal 
 
 
-
 
NC_011205  SeD_A1024  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000719526  normal 
 
 
-
 
NC_011094  SeSA_A1073  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000166195  normal 
 
 
-
 
NC_011149  SeAg_B0964  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000969196  n/a   
 
 
-
 
NC_011083  SeHA_C1058  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  decreased coverage  0.000658641  normal 
 
 
-
 
NC_013421  Pecwa_1986  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  4.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  0.64528  n/a   
 
 
-
 
NC_012880  Dd703_2261  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  6e-32  Dickeya dadantii Ech703  Bacteria  normal  0.0124412  n/a   
 
 
-
 
NC_012917  PC1_1718  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  6e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.159084  n/a   
 
 
-
 
NC_012912  Dd1591_2361  leucine-responsive transcriptional regulator  46 
 
 
164 aa  138  6e-32  Dickeya zeae Ech1591  Bacteria  normal  0.84534  n/a   
 
 
-
 
NC_009511  Swit_1115  AsnC family transcriptional regulator  44.67 
 
 
164 aa  138  6e-32  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.266621 
 
 
-
 
NC_011312  VSAL_I1840  leucine-responsive transcriptional regulator  46 
 
 
163 aa  137  8.999999999999999e-32  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.757131  n/a   
 
 
-
 
NC_008752  Aave_3320  AsnC family transcriptional regulator  44.23 
 
 
170 aa  136  2e-31  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.0097323  normal 
 
 
-
 
NC_008786  Veis_4443  AsnC family transcriptional regulator  45.33 
 
 
157 aa  136  2e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.270446 
 
 
-
 
NC_008686  Pden_2266  AsnC family transcriptional regulator  44.67 
 
 
153 aa  135  3.0000000000000003e-31  Paracoccus denitrificans PD1222  Bacteria  normal  0.400993  normal  0.321257 
 
 
-
 
NC_011365  Gdia_0882  transcriptional regulator, AsnC family  43.71 
 
 
152 aa  135  3.0000000000000003e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3749  AsnC family transcriptional regulator  45.91 
 
 
181 aa  135  4e-31  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.648242 
 
 
-
 
NC_008709  Ping_3606  transcriptional regulator of AsnC/Lrp family protein  45.1 
 
 
155 aa  135  4e-31  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0459  AsnC family transcriptional regulator  45.33 
 
 
160 aa  135  4e-31  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2597  leucine-responsive transcriptional regulator  44.67 
 
 
164 aa  134  8e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000282665  n/a   
 
 
-
 
NC_010465  YPK_2686  leucine-responsive transcriptional regulator  44.67 
 
 
164 aa  134  8e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_010159  YpAngola_A1612  leucine-responsive transcriptional regulator  44.67 
 
 
164 aa  134  8e-31  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000163573  normal 
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  45.33 
 
 
167 aa  133  9.999999999999999e-31  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  43.12 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_011662  Tmz1t_0193  transcriptional regulator, AsnC family  45.03 
 
 
161 aa  132  3e-30  Thauera sp. MZ1T  Bacteria  normal  0.740343  n/a   
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  44 
 
 
167 aa  132  3e-30  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  42.21 
 
 
165 aa  131  5e-30  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  44 
 
 
167 aa  131  6e-30  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  44.67 
 
 
167 aa  131  6e-30  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  44 
 
 
167 aa  130  9e-30  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_011992  Dtpsy_1428  transcriptional regulator, AsnC family  45.7 
 
 
159 aa  130  1.0000000000000001e-29  Acidovorax ebreus TPSY  Bacteria  normal  0.92008  n/a   
 
 
-
 
NC_008782  Ajs_2419  AsnC family transcriptional regulator  45.7 
 
 
159 aa  130  1.0000000000000001e-29  Acidovorax sp. JS42  Bacteria  normal  0.370827  normal  0.408785 
 
 
-
 
NC_009636  Smed_2574  AsnC family transcriptional regulator  40.52 
 
 
154 aa  128  4.0000000000000003e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.0518335  normal  0.327443 
 
 
-
 
NC_009667  Oant_1596  AsnC family transcriptional regulator  42.48 
 
 
153 aa  128  6e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.699626  n/a   
 
 
-
 
NC_004310  BR1571  leucine-responsive regulatory protein  42.48 
 
 
153 aa  127  7.000000000000001e-29  Brucella suis 1330  Bacteria  normal  0.787387  n/a   
 
 
-
 
NC_009505  BOV_1518  leucine-responsive regulatory protein  42.48 
 
 
153 aa  127  7.000000000000001e-29  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0245  transcriptional regulator  43.05 
 
 
169 aa  127  7.000000000000001e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1990  transcriptional regulator, AsnC family  40.83 
 
 
161 aa  127  9.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.141708  n/a   
 
 
-
 
NC_011206  Lferr_1659  transcriptional regulator, AsnC family  40.83 
 
 
161 aa  127  9.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.31019  normal  0.273663 
 
 
-
 
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