Gene Dshi_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0245 
SymbolasnC 
ID5712171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp243155 
End bp243664 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID641266141 
Producttranscriptional regulator 
Protein accessionYP_001531595 
Protein GI159042801 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAT CTTGCATAAA TGATTTTAAA ACAGGAAAAT CTTGCGTCAT GATCGCCTTG 
GACGACACGG ATCACCGTCT GCTCTCGGCC CTTCAGAGGG CCGGGCGCCT GTCCAACGCC
GAGTTGTCGG AGCGTGTGCA CCTGTCGCCT TCGGCCTGCC ACCGCCGCGT CGCCCGGATG
GAGGCGGCAG GCGTCATCAA GGACTACGTC GCCCTCGTCG ACCCGCGCGC CGTGGACCGC
AAGACCACCG TCTTCGTCGA GGTCACCTTG TCCGGCCAGG CCGACGAGGT GCTCGTGGCC
TTCGAGGCGG CCGTCGCACA GGTGCCCGAA GTGCTCGAAT GCCACCTGAT GGCGGGATCG
GCGGATTACC TGCTCAAGGT CGTGGCCCAG GATACTGAGG CGTTCGCCGC CCTCCACCGG
CGCCACCTGG CCACCCTGCC GGGGGTCGCG CAGATCCAGT CGAGCTTCGC CTTGCGGACC
GTGTTCAAGA CCACCGCCCT GCCGCTTTGA
 
Protein sequence
MLKSCINDFK TGKSCVMIAL DDTDHRLLSA LQRAGRLSNA ELSERVHLSP SACHRRVARM 
EAAGVIKDYV ALVDPRAVDR KTTVFVEVTL SGQADEVLVA FEAAVAQVPE VLECHLMAGS
ADYLLKVVAQ DTEAFAALHR RHLATLPGVA QIQSSFALRT VFKTTALPL